Information on SUBCLASS 2.3.12 |
Subclass Accession number: 6113
Subclass: 2.3.12 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 20.4 +/- 26.9 Average RMSD (Å) : 0.400 +/- 0.193 Consensus geometry
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Consensus Sequence: | hhcpXp |
(φψ)-conformation: | bbeabb |
Pattern: | [dgtv] | [qrs] | [giwy] | [FILMW] | [HLVY] | [DHNS] | [deqrs] | x | [EQ] | x |
Conservation: | -0.867 | -0.352 | -0.924 | 0.249 | 0.292 | 1.004 | -0.471 | -0.350 | 2.252 | -0.835 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1buo_A_36 | 1buo | A | 36 | 45 | VVIMVDSQEF | EEEEESS-EE | bbbbbeapbb |
1d5m_B_23 | 1d5m | B | 28 | 37 | DRYFYHQEEY | EEEEETTEEE | bbbbbeaxxa |
1fng_B_24 | 1fng | B | 28 | 37 | VRYFYNLEEN | EEEEETTEEE | bbbbbeabxa |
1fp5_A_475 | 1fp5 | A | 476 | 484 | VQWLHNEVQ. | EEEEETTEE. | bbbbbeabx. |
1fv1_B_23 | 1fv1 | B | 28 | 37 | HRDIYNQEED | EEEEETTEEE | bbbbbeabxa |
1gzq_A_23 | 1gzq | A | 28 | 37 | GSGWLDDLQI | EEEEETTEEE | bbbbbeaxxa |
1onq_A_23 | 1onq | A | 28 | 37 | VSGWLSDLQT | EEEEETTEEE | bbbbbeaxxa |
1uvq_B_23 | 1uvq | B | 28 | 37 | TRYIYNREEY | EEEEETTEEE | xbbbbeabxa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gzq_A_23 | 1gzq | A | AC6TWT BINDING SITE FOR CHAIN A | W - 40 |
1uvq_B_23 | 1uvq | B | AC8ACY BINDING SITE FOR CHAIN B | N - 33 |
1uvq_B_23 | 1uvq | B | AC8ACY BINDING SITE FOR CHAIN B | E - 35 |
Clusters included in this Subclass |
CLUSTER: HA.2.98 |
CLUSTER: HA.3.82 |