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Information on SUBCLASS 2.5.7
Subclass Accession number: 6143
Subclass: 2.5.7 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 15.7 +/- 18.8
Average RMSD (Å) : 0.320 +/- 0.239

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: pXpGpX
(φψ)-conformation: bbllbb
Pattern: [dety][KTV][ehkn][g][EKT][ptv][AIMTV]
Conservation:-1.172-0.248-0.3622.0270.332-0.446-0.131
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e25_A_2401e25   A240246IKAGKTAEETTEEExblvbba
1gr3_A_5951gr3   A615621YKNGTPVEETTEEEbblvbwa
1j7g_A_21j7g   A1420DVKGETIEETTEEEbblvbxa
1jke_A_21jke   A1420TVEGEVTEETTEEEbbvvxxa
1jny_A_2721jny   A280286ETHHTKMEETTEEEbbvvbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gr3_A_5951gr3   A     CPS3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE H - 609
1gr3_A_5951gr3   A     CPS3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE W - 611
1gr3_A_5951gr3   A     CPS3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE Y - 625
1gr3_A_5951gr3   A     CACALCIUM ION D - 626
1jke_A_21jke   A     ZNZINC ION E - 16
1jke_A_21jke   A     ZNZINC ION E - 18
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gr3_A_5951gr3   A CPSCPS BINDING SITE FOR CHAIN AW - 611
1gr3_A_5951gr3   A CPSCPS BINDING SITE FOR CHAIN AK - 616
1gr3_A_5951gr3   A CPSCPS BINDING SITE FOR CHAIN AY - 625

Clusters included in this Subclass
CLUSTER: HA.2.86