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Information on SUBCLASS 3.3.1
Subclass Accession number: 6173
Subclass: 3.3.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 56

Average sequence ID (%) : 18.9 +/- 18.1
Average RMSD (Å) : 0.398 +/- 0.117

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XpXXXGX
(φψ)-conformation: bbaaaeb
Pattern: x[cdehknrst][deknpqrst]xx[DGKS]xx
Conservation:-0.4750.200-0.224-0.486-0.5602.398-0.524-0.329
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aor_A_2961aor   A300307RLPTVGETEETTTEEEbbaaaexb
1csh_*_561csh   -5865LDPDEGIREETTTEEEbxaaaexb
1d4d_A_2881d4d   A294301KGEYTGYYEETTTEEExxaaaexb
1dfx_*_1101dfx   -114121YCNLHGHWEETTTEEEbbaaaexb
1dqi_A_1031dqi   A110117YCNIHGLWEETTTEEEbxaaaexb
1e1a_A_841e1a   A8895ADMRLGLLEETTTEEExbaaaebb
1ekg_A_1531ekg   A157164SSPSSGPKEETTTEEEbxaaaewb
1ekm_A_2641ekm   A270277FNYREGIVEETTTEEEbbaaaexb
1ewq_A_4391ewq   A442449YNAVFGYYEETTTEEEbbaaaexb
1f1j_A_2331f1j   A233239RSPGRGS.EETTTEE.bxaaaex.
1flt_X_1841flt   X186193WDSRKGFIEETTTEEEbbaaaexb
1g0u_1_1721g0u   1178185IDKNTGLTEETTTEEEbbaaaebb
1g0u_2_971g0u   2104111YDDKNKGEEETTTEEEbbaaaexb
1g0u_A_1341g0u   A141148HDEFNGFSEETTTEEEbbaaaexb
1g0u_B_1341g0u   B141148YDDRYGYQEETTTEEEbbaaaexb
1g0u_D_1341g0u   D141148HDADDGYQEETTTEEEbbaaaexb
1g0u_D_2101g0u   D215222ITKQDGFKEETTTEEEbbaaaexb
1g0u_K_981g0u   K104111YTRKEGPTEETTTEEEbbaaaewb
1g3k_A_1031g3k   A106113ITGIGDVVEETTTEEEbbaaaexb
1g8k_A_6471g8k   A648655WDESKGLVEETTTEEEbbaaaexb
1gpi_A_161gpi   A1926CTTSGGCKEETTTEEEbbaaaebb
1h5w_A_621h5w   A6774KDPVISYIEETTTEEExxaaaepb
1i6i_A_1681i6i   A170177EHPLLGPYEETTTEEEbxaaaewb
1inl_A_471inl   A5259ENPDLGVVEETTTEEEbbaaaexb
1ivw_A_2431ivw   A249256FDVREGVVEETTTEEEbbaaaexb
1iy9_A_331iy9   A3845ETEEFGNMEETTTEEEbxaaaexb
1izn_B_1641izn   B180187NKTGSGTMEEGGGEEEbbaaaebb
1j09_A_1551j09   A159166KDELRGVVEETTTEEEbbaaaexb
1jk4_A_261jk4   A2835CGDELGCFEETTTEEEbbaaaebb
1ksi_A_2431ksi   A249256FDVRAGIVEETTTEEEbbaaaexb
1lbv_A_621lbv   A6572VTEESGVLEETTTEEEbbaaaexb
1m15_A_2611m15   A261267HDDRFGF.EETTTEE.bbaaaex.
1m6i_A_4401m6i   A443450YDIKLGRREETTTEEEbxaaaepb
1m72_A_2241m72   A224230RNTTRGS.EETTTEE.bbaaaex.
1mjf_A_311mjf   A3643ETEGFGRLEESSS-EExxaaaexb
1n16_A_2731n16   A273279WNEHLGY.EETTTEE.bbaaaex.
1n6a_A_3091n6a   A309315VHPRFGP.EETTTEE.xxaaaex.
1n7m_L_341n7m   L3946QRPGRGLEEETTTEEEbbaaaexb
1n9e_A_3471n9e   A353360WSRDTGISEETTTEEEbbaaaexb
1nqe_A_3511nqe   A361368DNSQFGRHEETTTEEEbbaaaexb
1nzj_A_1411nzj   A143150TDQLRGIIEETTTEEExbaaaexb
1nzo_A_2091nzo   A216223HTDKAGYNEETTTEEEbbaaaexb
1oac_A_3281oac   A334341MNSRVGPMEETTTEEEbbaaaewb
1ogs_A_4681ogs   A473480KDPAVGFLEETTTEEEbbaaaebb
1on2_A_521on2   A5461YEKYRGLVEETTTEEExbaaaexb
1ooy_A_4351ooy   A439446VDRKKGLTEETTTEEEbbaaaexb
1pii_*_571pii   -5763ASPSKGV.EETTTEE.bbaaaex.
1pyo_B_2311pyo   B231237RNTKRGS.EETTTEE.bxaaaex.
1q9i_A_2891q9i   A295302KGMYKGYYEETTTEEEbxaaaexb
1qh4_A_2731qh4   A273279WNPHLGY.EETTTEE.bbaaaex.
1qtn_B_4131qtn   B413419RNPAEGT.EETTTEE.bxaaaex.
1qxo_A_2761qxo   A278285WSKEDGYTEETTTEEEbbaaaexb
1rwr_A_551rwr   A5663VSRIGGALEETTTEEEbxaaaexb
1uir_A_341uir   A3946ESKGFGKVEETTTEEExbaaaexb
1ukf_A_2221ukf   A226233FDPNLGEFEETTTEEEbbaaaebb
1vdw_A_641vdw   A6673VSEEIGRIEETTTEEEbbaaaebx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aor_A_2961aor   A     FS4IRON/SULFUR CLUSTER G - 296
1aor_A_2961aor   A     NAWSODIUM ION, 3 WATERS COORDINATED G - 296
1aor_A_2961aor   A     FEFE (III) ION G - 296
1aor_A_2961aor   A     NAWSODIUM ION, 3 WATERS COORDINATED R - 297
1aor_A_2961aor   A     FEFE (III) ION T - 303
1aor_A_2961aor   A     NAWSODIUM ION, 3 WATERS COORDINATED E - 308
1csh_*_561csh   *     OAAOXALOACETATE ION L - 58
1d4d_A_2881d4d   A     HEMPROTOPORPHYRIN IX CONTAINING FE E - 296
1d4d_A_2881d4d   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 297
1dfx_*_1101dfx   *     FEFE (III) ION C - 115
1dfx_*_1101dfx   *     FEFE (III) ION N - 116
1dfx_*_1101dfx   *     FEFE (III) ION L - 117
1dfx_*_1101dfx   *     FEFE (III) ION H - 118
1dqi_A_1031dqi   A     FEFE (III) ION C - 111
1dqi_A_1031dqi   A     FEFE (III) ION N - 112
1dqi_A_1031dqi   A     FEFE (III) ION I - 113
1dqi_A_1031dqi   A     FEFE (III) ION H - 114
1ewq_A_4391ewq   A     MSESELENOMETHIONINE V - 440
1ewq_A_4391ewq   A     MSESELENOMETHIONINE G - 441
1ewq_A_4391ewq   A     MSESELENOMETHIONINE Y - 448
1ewq_A_4391ewq   A     MSESELENOMETHIONINE Y - 449
1ewq_A_4391ewq   A     MSESELENOMETHIONINE L - 450
1m72_A_2241m72   A     ASKDEHYDROXYMETHYLASPARTIC ACID R - 224
1m72_A_2241m72   A     ASKDEHYDROXYMETHYLASPARTIC ACID S - 230
1n6a_A_3091n6a   A     MSESELENOMETHIONINE V - 309
1n6a_A_3091n6a   A     MSESELENOMETHIONINE P - 311
1n6a_A_3091n6a   A     MSESELENOMETHIONINE R - 312
1n7m_L_341n7m   L     MMPN-METHYLMESOPORPHYRIN H - 35
1nqe_A_3511nqe   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE F - 353
1nqe_A_3511nqe   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE E - 354
1nqe_A_3511nqe   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE G - 355
1nqe_A_3511nqe   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE A - 356
1nqe_A_3511nqe   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE A - 357
1nqe_A_3511nqe   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE R - 358
1nqe_A_3511nqe   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE S - 359
1nqe_A_3511nqe   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE R - 367
1nqe_A_3511nqe   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE H - 368
1nqe_A_3511nqe   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE G - 369
1nqe_A_3511nqe   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE T - 370
1nqe_A_3511nqe   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE W - 371
1nqe_A_3511nqe   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE Q - 372
1nqe_A_3511nqe   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE T - 373
1nqe_A_3511nqe   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE S - 374
1nqe_A_3511nqe   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE F - 379
1nqe_A_3511nqe   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE I - 380
1pii_*_571pii   *     PO4PHOSPHATE ION K - 61
1q9i_A_2891q9i   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 298
1qtn_B_4131qtn   B     ASAASPARTIC ALDEHYDE R - 413
1qtn_B_4131qtn   B     ASAASPARTIC ALDEHYDE T - 419
1qxo_A_2761qxo   A     MSESELENOMETHIONINE I - 276
1qxo_A_2761qxo   A     MSESELENOMETHIONINE L - 277
1qxo_A_2761qxo   A     EGLETHYLENE GLYCOL D - 282
1qxo_A_2761qxo   A     EGLETHYLENE GLYCOL G - 283
1qxo_A_2761qxo   A     EGLETHYLENE GLYCOL Y - 284
1qxo_A_2761qxo   A     EGLETHYLENE GLYCOL T - 285
1qxo_A_2761qxo   A     EGLETHYLENE GLYCOL R - 286
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1ogs_A_4681ogs   A AC8SO4 BINDING SITE FOR CHAIN AK - 473

Clusters included in this Subclass
CLUSTER: HA.2.11
CLUSTER: HA.3.250
CLUSTER: HA.4.9