Information on SUBCLASS 3.5.3 |
Subclass Accession number: 6187
Subclass: 3.5.3 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.8 (>75 %) 2.8.2 (>75 %) 2.8.2.4 GO : GO:0004304 (>75 %) GO:0005496 (>75 %) GO:0008146 (>75 %) GO:0016782 (>75 %) SCOP : 52539 (>75 %) 52540 (>75 %) 52575 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 11.9 +/- 24.3 Average RMSD (Å) : 0.800 +/- 0.356 Consensus geometry
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Consensus Sequence: | XpXXhXX |
(φψ)-conformation: | bbeaabb |
Pattern: | [GRS] | [KNQY] | [EGR] | [CDN] | [ILY] | x | x |
Conservation: | -0.245 | -0.371 | -0.267 | 0.967 | 1.404 | -1.671 | 0.183 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aqu_A_85 | 1aqu | A | 85 | 91 | RNEDLIN | EETTTEE | bbeaabb |
1g3m_A_84 | 1g3m | A | 84 | 90 | RKENLMN | EETTTEE | bbeaabb |
1jlt_B_24 | 1jlt | B | 24 | 30 | SYGCYCG | EETTTEE | bbeaaxe |
1oao_C_417 | 1oao | C | 421 | 427 | GQRNINW | EETTEEE | ebeaaxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1aqu_A_85 | 1aqu | A | ESTESTRADIOL | R - 85 |
1aqu_A_85 | 1aqu | A | ESTESTRADIOL | N - 86 |
1aqu_A_85 | 1aqu | A | ESTESTRADIOL | I - 90 |
1g3m_A_84 | 1g3m | A | PCQ3,5,3',5'-TETRACHLORO-BIPHENYL-4,4'-DIOL | K - 85 |
1jlt_B_24 | 1jlt | B | MPD2-METHYL-2,4-PENTANEDIOL | Y - 28 |
1jlt_B_24 | 1jlt | B | MPD2-METHYL-2,4-PENTANEDIOL | C - 29 |
1jlt_B_24 | 1jlt | B | MPD2-METHYL-2,4-PENTANEDIOL | G - 30 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1oao_C_417 | 1oao | C | GC2SO4 BINDING SITE FOR CHAIN C | R - 429 |
Clusters included in this Subclass |
CLUSTER: HA.2.106 |