Information on SUBCLASS 3.17.1 |
Subclass Accession number: 6215
Subclass: 3.17.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 11.5 +/- 15.0 Average RMSD (Å) : 0.588 +/- 0.155 Consensus geometry
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Consensus Sequence: | XXhXXXh |
(φψ)-conformation: | bbeaNbb |
Pattern: | x | x | x | [CGL] | x | [adknqs] | [AEGRST] | [flpvy] | [akmtv] |
Conservation: | -0.630 | -1.200 | -0.575 | 2.288 | -0.425 | 0.048 | 0.476 | -0.298 | 0.316 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bg2_*_32 | 1bg2 | - | 32 | 40 | KFQGEDTVV | EEETTTEEE | bbbeaNbbb |
1g0u_1_34 | 1g0u | 1 | 35 | 43 | IPVGDNTVV | EE-TTSEEE | bwbeaNbbb |
1h16_A_414 | 1h16 | A | 415 | 423 | AIACCVSPM | EEETTTEEE | bxxeaNbwb |
1i5p_A_381 | 1i5p | A | 383 | 391 | DREGVATST | EEETTTEEE | bbbeaNxbb |
1n8q_A_336 | 1n8q | A | 336 | 344 | RTDGEQALK | EEETTTEEE | xbbeaNbxb |
1o26_A_1 | 1o26 | A | 3 | 11 | IDILDKGFV | EEETTTEEE | bxbeaNxbb |
1q4g_A_46 | 1q4g | A | 48 | 56 | VRFGLDRYQ | EEETTTEEE | bxbeaNxbb |
3ezm_A_58 | 3ezm | A | 62 | 70 | QLAGSSELA | EEETTTEEE | bxxeaNxxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1h16_A_414 | 1h16 | A | PYRPYRUVIC ACID | A - 417 |
1h16_A_414 | 1h16 | A | PYRPYRUVIC ACID | C - 418 |
1h16_A_414 | 1h16 | A | PYRPYRUVIC ACID | C - 419 |
1h16_A_414 | 1h16 | A | PYRPYRUVIC ACID | S - 421 |
1q4g_A_46 | 1q4g | A | NAGN-ACETYL-D-GLUCOSAMINE | Y - 55 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h16_A_414 | 1h16 | A | PYRPYR BINDING SITE FOR CHAIN A | C - 418 |
Clusters included in this Subclass |
CLUSTER: HA.4.85 |