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Information on SUBCLASS 4.1.8
Subclass Accession number: 6243
Subclass: 4.1.8 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 22

Average sequence ID (%) : 9.4 +/- 13.4
Average RMSD (Å) : 0.405 +/- 0.189

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 225-270
Consensus Sequence: XpXXXcXX
(φψ)-conformation: bbaaalbb
Pattern: xx[dehnqs]xxxxxx[adegknqrst]
Conservation:-0.780-0.1332.446-0.472-0.5860.0030.968-0.829-0.385-0.232
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bjn_A_1511bjn   A151158.NETIDGIA..EETTTTEE..bxaaavbb.
1bk1_*_161bk1   -1827TYDESAGTFSEEEGGGTEEEbbbaaavbbb
1bt4_A_1511bt4   A151158.NETIEGAQ..EETTTTEE..bxaaavbb.
1cyx_*_1721cyx   -174183FFIPRLGSQIEEEGGGTEEExbbaaalbbb
1ewq_A_1431ewq   A147156FLDVSTGEFKEEETTTTEEEbbbaaavpbb
1fm4_A_661fm4   A7382EVDHTNFKYNEEETTTTEEEbbbaaalbbb
1frd_*_21frd   -716LINKKQDIDTEEETTTTEEEbbbaaalbbb
1icx_A_631icx   A7281AIDEANLTYNEEEGGGTEEEbbbaaalbbb
1ifv_A_651ifv   A7281AIDEASFEYNEEETTTTEEEbbbaaalbbb
1izn_A_1511izn   A162171QFQPKNFWNGEEEGGGTEEEbbbaaalbbb
1ji1_A_5551ji1   A560569ITDDTNKIYSEEETTTTEEEbbbaaalbbb
1ji2_A_5041ji2   A509518HADKQANLYAEEETTTTEEEbbbaaalbbb
1ksi_A_2541ksi   A262271IYDLEKHKSREEETTTTEEEbxxaaalbxb
1l3a_A_2001l3a   A207216VQNKLINLDEEEEGGGTEEEbbbaaalxbb
1lcy_A_281lcy   A3544DRHPFLGREVEEETTTTEEExxbaaalbbb
1m56_B_2171m56   B219228WTVPAFGVKQEEEGGGTEEEbbbaaavbbb
1n0u_A_2091n0u   A211220FGSGLHGWAFEEETTTTEEEbbbaaagbbb
1n0x_H_461n0x   H5059WINPYNGNKEEE-TTT--EEbbxaaavxbb
1qd6_C_2061qd6   C213222QYNWNTGYGGEE-TTT--EEbbxaaavxbb
1su4_A_4781su4   A486495EFSRDRKSMSEEETTTTEEEpxbaaalbbb
1uwc_A_351uwc   A4150IYNAQTDINGEEETTTTEEEbbbaaalxbb
1ux2_A_271ux2   A4049EVNEITNEVDEEETTTTEEEbbbaaalbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bjn_A_1511bjn   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) N - 151
1bjn_A_1511bjn   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) E - 152
1bjn_A_1511bjn   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) T - 153
1bt4_A_1511bt4   A     PLPPYRIDOXAL-5'-PHOSPHATE N - 151
1bt4_A_1511bt4   A     PLPPYRIDOXAL-5'-PHOSPHATE E - 152
1bt4_A_1511bt4   A     PLPPYRIDOXAL-5'-PHOSPHATE T - 153
1cyx_*_1721cyx   *     CUADINUCLEAR COPPER ION H - 172
1cyx_*_1721cyx   *     CUADINUCLEAR COPPER ION S - 173
1fm4_A_661fm4   A     DHODEOXYCHOLIC ACID V - 67
1fm4_A_661fm4   A     DHODEOXYCHOLIC ACID D - 69
1fm4_A_661fm4   A     DHODEOXYCHOLIC ACID Y - 81
1fm4_A_661fm4   A     DHODEOXYCHOLIC ACID Y - 83
1fm4_A_661fm4   A     DHODEOXYCHOLIC ACID V - 85
1ksi_A_2541ksi   A     MNMANGANESE (II) ION Y - 275
1ksi_A_2541ksi   A     TPQ5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE L - 282
1ksi_A_2541ksi   A     TPQ5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE V - 284
1m56_B_2171m56   B     CUCOPPER (II) ION H - 217
1m56_B_2171m56   B     CUCOPPER (II) ION S - 218
1m56_B_2171m56   B     MGMAGNESIUM ION S - 218
1m56_B_2171m56   B     MGMAGNESIUM ION D - 229
1n0x_H_461n0x   H     ORNORNITHINE W - 50
1n0x_H_461n0x   H     GOLGLYCEROL I - 51
1n0x_H_461n0x   H     ORNORNITHINE N - 52
1n0x_H_461n0x   H     GOLGLYCEROL N - 52
1ux2_A_271ux2   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID I - 36
1ux2_A_271ux2   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID W - 53
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1uwc_A_351uwc   A AC3NAG BINDING SITE FOR CHAIN BN - 43
1ux2_A_271ux2   A BC2EPE BINDING SITE FOR CHAIN EW - 53

Clusters included in this Subclass
CLUSTER: HA.3.43
CLUSTER: HA.5.34