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Information on SUBCLASS 4.1.25
Subclass Accession number: 6260
Subclass: 4.1.25 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 18.2 +/- 16.6
Average RMSD (Å) : 0.400 +/- 0.100

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XpXXppph
(φψ)-conformation: bbaaalbb
Pattern: x[CL]x[DHN][LT][CK][KT][KNQ][KT][AVW][LV]
Conservation:-1.5290.736-1.6700.8610.1060.1420.6410.2990.587-1.2481.075
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1n4k_A_3891n4k   A389399RLRHLCTNTWVEEEEGGGTEEEbbbxaaavbbp
1njk_A_971njk   A107117VCIDLKTQKALEEEETTTTEEEbbbbaaavbxx
1viu_A_471viu   A5161LLYNTKKKTVVEEEETTTTEEEbbbbaaalbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1njk_A_971njk   A     MSESELENOMETHIONINE C - 108
1viu_A_471viu   A     MSESELENOMETHIONINE Y - 53
1viu_A_471viu   A     MSESELENOMETHIONINE N - 54
1viu_A_471viu   A     MSESELENOMETHIONINE T - 55
1viu_A_471viu   A     MSESELENOMETHIONINE K - 57
1viu_A_471viu   A     MSESELENOMETHIONINE K - 58
1viu_A_471viu   A     MSESELENOMETHIONINE T - 59
1viu_A_471viu   A     MSESELENOMETHIONINE V - 60

Clusters included in this Subclass
CLUSTER: HA.3.221