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Information on SUBCLASS 4.2.2
Subclass Accession number: 6266
Subclass: 4.2.2 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 12.5 +/- 13.0
Average RMSD (Å) : 0.967 +/- 0.208

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hhhpXchX
(φψ)-conformation: bpabaabb
Pattern: x[PWY][ALP][AI][DNT][DP][DN][LW][DSV][AIY][GIY]x[AR][AL][GTV][AGP]
Conservation:-1.0000.208-0.8860.2590.4271.4522.2580.665-0.995-0.667-1.323-0.9950.4220.288-0.886-0.229
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1l8f_A_611l8f   A6175.WAINDNLSYGFAATA.EESSSSEEEEEEEEE.bxabaabbbbbbxbb
1nh8_A_2381nh8   A240255APLADPDWVAIRALVPEE-SSTTEEEEEEEEEbxxaxaabbbbbbxbp
1qjp_A_721qjp   A8499GYPITDDLDIYTRLGGEEESSSSEEEEEEEEEbbxabaabbbbbbbeb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1nh8_A_2381nh8   A     HISHISTIDINE L - 242
1nh8_A_2381nh8   A     HISHISTIDINE A - 249
1nh8_A_2381nh8   A     HISHISTIDINE I - 250
1qjp_A_721qjp   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE V - 77
1qjp_A_721qjp   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE Q - 78
1qjp_A_721qjp   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE L - 79
1qjp_A_721qjp   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE T - 80
1qjp_A_721qjp   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE A - 81
1qjp_A_721qjp   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE L - 83
1qjp_A_721qjp   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE G - 84
1qjp_A_721qjp   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE Y - 85
1qjp_A_721qjp   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE I - 93
1qjp_A_721qjp   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE Y - 94
1qjp_A_721qjp   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE T - 95
1qjp_A_721qjp   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE L - 97
1qjp_A_721qjp   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE G - 98
1qjp_A_721qjp   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE G - 99
1qjp_A_721qjp   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE M - 100
1qjp_A_721qjp   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE V - 101

Clusters included in this Subclass
CLUSTER: HA.5.218