Information on SUBCLASS 4.2.3 |
Subclass Accession number: 6267
Subclass: 4.2.3 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 16.7 +/- 19.2 Average RMSD (Å) : 0.500 +/- 0.100 Consensus geometry
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Consensus Sequence: | pXXXXhhX |
(φψ)-conformation: | pbabaabb |
Pattern: | x | [EKR] | [GT] | [AK] | x | [EPQ] | [AW] | [AIV] | [FK] | [EFK] |
Conservation: | -1.230 | 0.575 | 0.349 | 0.330 | -0.398 | 0.019 | 2.113 | -0.120 | -0.131 | -1.508 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1beb_A_66 | 1beb | A | 74 | 83 | EKTKIPAVFK | EE-SSTTEEE | xxbaxaabbb |
1ni4_A_346 | 1ni4 | A | 348 | 357 | VRGANQWIKF | EE-SSTT-EE | bxbabaabbb |
1qxy_A_213 | 1qxy | A | 213 | 222 | TEGKNEWAFE | EE-SSSS-EE | bpxabaaxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1qxy_A_213 | 1qxy | A | M2C(2S)-2-AMINO-4-(METHYLSULFANYL)-1-PYRIDIN-2-YLBUTANE-1,1-DIOL | W - 219 |
1qxy_A_213 | 1qxy | A | M2C(2S)-2-AMINO-4-(METHYLSULFANYL)-1-PYRIDIN-2-YLBUTANE-1,1-DIOL | F - 221 |
Clusters included in this Subclass |
CLUSTER: HA.5.182 |