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Information on SUBCLASS 4.3.4
Subclass Accession number: 6273
Subclass: 4.3.4 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 11

Average sequence ID (%) : 20.5 +/- 24.1
Average RMSD (Å) : 0.582 +/- 0.236

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 225-270
Consensus Sequence: XpXpGpXX
(φψ)-conformation: bbaagpbb
Pattern: [afgikv][ltvy]x[CDST]x[dehkrsy][GKR][adknrs]xx[aktv]
Conservation:-0.600-0.135-0.5031.415-0.723-0.6602.338-0.042-0.905-0.3200.136
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1am2_*_441am2   -6070AVRTVEGLRVTEEEETTS-EEExxbbaagxbbb
1br9_*_171br9   -3141SGNDIYGNPIKEEE-TTS-EEEaebxaavxpbx
1f3u_B_1251f3u   B127137FTQCPDGAFEAEEE-TTS-EEEbbxbaavxbbb
1hrh_A_4521hrh   A456466GYVTNKGRQKVEEEETTS-EEEebbbaavxbbb
1i1q_A_4521i1q   A454464GYFTAHGDLDTEEEETTS-EEEebbbaagxbbb
1i7q_A_4521i7q   A454464GYFTAVRNLDTEEEETTS-EEEebbbaavxbbb
1mi8_A_471mi8   A5868ILKTRLGRTIKEEEETT--EEExbbbaagxbbb
1mu2_A_4521mu2   A455465GYVTDRGKDKVEEEETTS-EEEbbbbaavxbbb
1osp_O_1091osp   O113123KVTSKDKSSTEEEEETTS-EEEbbbxaavxbbb
1p1j_A_251p1j   A3747VTKTASGRFDVEEE-TTS-EEEbbbxaavbxxb
1vrt_A_4561vrt   A456466GYVTNRGRQKVEEEETTS-EEEebbbaavxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1i1q_A_4521i1q   A     TRPTRYPTOPHAN V - 453
1i1q_A_4521i1q   A     TRPTRYPTOPHAN G - 454
1i1q_A_4521i1q   A     TRPTRYPTOPHAN Y - 455
1i1q_A_4521i1q   A     TRPTRYPTOPHAN D - 463
1i1q_A_4521i1q   A     TRPTRYPTOPHAN T - 464
1i1q_A_4521i1q   A     TRPTRYPTOPHAN C - 465

Clusters included in this Subclass
CLUSTER: HA.3.119
CLUSTER: HA.4.165
CLUSTER: HA.4.241
CLUSTER: HA.5.103
CLUSTER: HA.5.119