Information on SUBCLASS 4.3.5 |
Subclass Accession number: 6274
Subclass: 4.3.5 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 11.7 +/- 24.3 Average RMSD (Å) : 0.917 +/- 0.360 Consensus geometry
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Consensus Sequence: | pXpppXXh |
(φψ)-conformation: | bbaagpbb |
Pattern: | [ekr] | x | x | [DNQS] | [DEGQ] | x | x | [ILTY] |
Conservation: | 0.396 | -1.312 | -0.455 | 1.503 | 1.017 | -0.808 | -0.845 | 0.503 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1js8_A_2863 | 1js8 | A | 2870 | 2877 | KGIDGHVL | EESSS-EE | bxaagxxx |
1l2h_A_5 | 1l2h | A | 11 | 18 | RDSQQKSL | EETT--EE | bxaavxxb |
1qkz_H_169 | 1qkz | H | 169 | 176 | VLQSDLYT | EE-SSSEE | bxaavbbb |
1qpx_A_31 | 1qpx | A | 38 | 45 | ENENQEKI | EETTS-EE | bxaavbxb |
2ncd_A_474 | 2ncd | A | 483 | 490 | EIYNEVLY | EESSS-EE | bbaavbxb |
8i1b_*_6 | 8i1b | - | 11 | 18 | RDEQQKSL | EETT--EE | bxaavxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1js8_A_2863 | 1js8 | A | MANALPHA-D-MANNOSE | L - 2877 |
Clusters included in this Subclass |
CLUSTER: HA.3.121 |
CLUSTER: HA.4.259 |