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Information on SUBCLASS 4.8.2
Subclass Accession number: 6287
Subclass: 4.8.2 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 15.5 +/- 19.9
Average RMSD (Å) : 0.720 +/- 0.110

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: hpXpGpph
(φψ)-conformation: bbaalabb
Pattern: x[AFMV][ADST]x[DNST][GQ]x[DST][FLTW][IVY]x
Conservation:-1.052-0.2850.027-1.3740.5941.821-0.8610.591-0.4440.983-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dix_A_1691dix   A177186CVDGSGSSLI.EEETTSSSEE.bbxaavabpb.
1kex_A_801kex   A8999DVSSNGEDWITEEESSSS-EEEbbbaavaxbbx
1uca_A_1601uca   A168177CFAQDGSTLI.EEETTSSSEE.bbxaavaxxb.
1uyp_A_1021uyp   A108118VMSENGLDFVKEEESSSS--EEbbbaavabbbx
2bce_*_662bce   -6675QATLTQDSTY.EEETT-SSEE.bbxaalabxb.
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1uyp_A_1021uyp   A     GOLGLYCEROL E - 103
1uyp_A_1021uyp   A     CITCITRIC ACID V - 107
1uyp_A_1021uyp   A     CITCITRIC ACID V - 108
1uyp_A_1021uyp   A     CITCITRIC ACID M - 109
1uyp_A_1021uyp   A     CITCITRIC ACID V - 117
1uyp_A_1021uyp   A     CITCITRIC ACID K - 118
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1uyp_A_1021uyp   A AC6NA BINDING SITE FOR CHAIN AM - 109
1uyp_A_1021uyp   A AC4CIT BINDING SITE FOR CHAIN AK - 118

Clusters included in this Subclass
CLUSTER: HA.4.218
CLUSTER: HA.5.221
CLUSTER: HA.6.129