Information on SUBCLASS 4.11.3 |
Subclass Accession number: 6293
Subclass: 4.11.3 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.3 (>50 %) 1.3.99 (>50 %) 1.3.99.1 GO : GO:0000104 (>50 %) GO:0016627 (>50 %) SCOP : 51904 (>50 %) 51905 (>50 %) 51934 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 13.3 +/- 17.1 Average RMSD (Å) : 0.433 +/- 0.115 Consensus geometry
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Consensus Sequence: | XhcXpXXh |
(φψ)-conformation: | pbpaalbp |
Pattern: | x | x | [LMV] | [DN] | x | [KQT] | x | [CKQ] | [PV] | [IT] | [DGP] | [AG] | [IL] | [FRY] | [AGS] |
Conservation: | -1.127 | -0.356 | 0.573 | 1.923 | -1.658 | -0.277 | -1.127 | -0.702 | 0.815 | 0.085 | -0.489 | 1.182 | 1.285 | -0.170 | 0.042 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1lur_A_1183 | 1lur | A | 1187 | 1201 | VEVDDTFCPTGAIRS | EEE-TTS-EEEEEEE | xxbxaavbpagxbbx |
1q9i_A_517 | 1q9i | A | 517 | 531 | EVMNAKKQVIPGLYG | EEE-TTS-EEEEEEE | xxbxaavxxxxvbbb |
1qo8_A_512 | 1qo8 | A | 512 | 526 | SVLDLQSKPIDGLFA | EEEBTTS-EEEEEEE | xxxxaavbxxxvbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1lur_A_1183 | 1lur | A | MSESELENOMETHIONINE | A - 1183 |
1lur_A_1183 | 1lur | A | MSESELENOMETHIONINE | D - 1184 |
Clusters included in this Subclass |
CLUSTER: HA.4.246 |