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Information on SUBCLASS 4.13.1
Subclass Accession number: 6296
Subclass: 4.13.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 11.1 +/- 11.9
Average RMSD (Å) : 0.700 +/- 0.245

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: hXXphphX
(φψ)-conformation: bbaalpbb
Pattern: xx[egqs][afgil]x[ADGQS][EHNS][gsv][knt][CGKLV]x[almy]
Conservation:-0.050-0.950-0.325-1.4380.3630.3612.3730.2840.782-1.099-0.3500.051
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1d3b_A_271d3b   A3243LIEAEDNMNCQMEEEE-TT--EEExabbbaavxbxb
1fid_*_1781fid   -181192YCEIDGSGNGWTEEEE-TTS-EEEbbbbbaavxbxx
1ga6_A_2211ga6   A221232NEGLDSNGKLWAEEEE-TTS-EEEbaexxaavxxbb
1i8f_A_321i8f   A3849LRSFDQHVNLLLEEEE-TT--EEExabbbaavxbbb
1m6k_A_1991m6k   A199210YLQDLDNSTKLYEEEE-TTS-EEEpabbxaavxxbb
1mdb_A_3251mdb   A328339QVFGMAEGLVNYEEEE-TTS-EEExbbbbaaIpbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1d3b_A_271d3b   A     GOLGLYCEROL R - 29
1d3b_A_271d3b   A     GOLGLYCEROL T - 47
1d3b_A_271d3b   A     GOLGLYCEROL V - 48
1d3b_A_271d3b   A     GOLGLYCEROL T - 49
1ga6_A_2211ga6   A     GOLGLYCEROL N - 221
1ga6_A_2211ga6   A     GOLGLYCEROL E - 222
1i8f_A_321i8f   A     GOLGLYCEROL E - 33
1i8f_A_321i8f   A     GOLGLYCEROL E - 54
1i8f_A_321i8f   A     GOLGLYCEROL I - 56
1m6k_A_1991m6k   A     KCXLYSINE NZ-CARBOXYLIC ACID K - 212
1m6k_A_1991m6k   A     MPD2-METHYL-2,4-PENTANEDIOL T - 213
1m6k_A_1991m6k   A     MPD2-METHYL-2,4-PENTANEDIOL G - 214
1m6k_A_1991m6k   A     MPD2-METHYL-2,4-PENTANEDIOL A - 215
1m6k_A_1991m6k   A     MPD2-METHYL-2,4-PENTANEDIOL G - 216
1mdb_A_3251mdb   A     AMPADENOSINE MONOPHOSPHATE Q - 328
1mdb_A_3251mdb   A     AMPADENOSINE MONOPHOSPHATE V - 329
1mdb_A_3251mdb   A     DBH2,3-DIHYDROXY-BENZOIC ACID V - 329
1mdb_A_3251mdb   A     AMPADENOSINE MONOPHOSPHATE F - 330
1mdb_A_3251mdb   A     DBH2,3-DIHYDROXY-BENZOIC ACID F - 330
1mdb_A_3251mdb   A     AMPADENOSINE MONOPHOSPHATE G - 331
1mdb_A_3251mdb   A     DBH2,3-DIHYDROXY-BENZOIC ACID G - 331
1mdb_A_3251mdb   A     AMPADENOSINE MONOPHOSPHATE M - 332
1mdb_A_3251mdb   A     DBH2,3-DIHYDROXY-BENZOIC ACID M - 332
1mdb_A_3251mdb   A     AMPADENOSINE MONOPHOSPHATE A - 333
1mdb_A_3251mdb   A     DBH2,3-DIHYDROXY-BENZOIC ACID A - 333
1mdb_A_3251mdb   A     AMPADENOSINE MONOPHOSPHATE E - 334
1mdb_A_3251mdb   A     DBH2,3-DIHYDROXY-BENZOIC ACID E - 334
1mdb_A_3251mdb   A     DBH2,3-DIHYDROXY-BENZOIC ACID G - 335
1mdb_A_3251mdb   A     DBH2,3-DIHYDROXY-BENZOIC ACID L - 336
1mdb_A_3251mdb   A     DBH2,3-DIHYDROXY-BENZOIC ACID V - 337
1mdb_A_3251mdb   A     DBH2,3-DIHYDROXY-BENZOIC ACID Y - 339

Clusters included in this Subclass
CLUSTER: HA.4.102