Logo
Information on SUBCLASS 4.13.3
Subclass Accession number: 6298
Subclass: 4.13.3 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0003723 (>50 %)  GO:0003729 (>50 %)  GO:0008248 (>50 %)  
SCOP : 50181 (>50 %)  50182 (>50 %)  50183 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 6.7 +/- 13.1
Average RMSD (Å) : 0.967 +/- 0.306

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXXphXhh
(φψ)-conformation: bbaalpbb
Pattern: x[LV]xx[FKV]xx[HNS][GM][ENW][LVW][FVY][CKL][GNQ]x
Conservation:0.6671.901-0.363-0.796-1.085-1.230-1.0851.3700.780-0.3630.0701.225-0.6520.359-0.796
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1m5q_1_231m5q   12337EVQVVLSNGEVYKGVEEEEEETTS-EEEEExbbbxbaavxbbbbx
1mgq_A_341mgq   A3953VLKSFDLHMNLVLNDEEEEE-TT--EEEEExxabbbaavxbbbbl
1ov3_A_1821ov3   A184198EVVEKSESGWWFCQMEEEEE-TTS-EEEEEbxabbbaavxbxbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1m5q_1_231m5q   1     MSESELENOMETHIONINE L - 28
1m5q_1_231m5q   1     GOLGLYCEROL N - 30
1m5q_1_231m5q   1     GOLGLYCEROL E - 32
1m5q_1_231m5q   1     GOLGLYCEROL Y - 34
1m5q_1_231m5q   1     CDCADMIUM ION H - 39
1m5q_1_231m5q   1     GOLGLYCEROL H - 39

Clusters included in this Subclass
CLUSTER: HA.4.214