Information on SUBCLASS 1.1.2 |
Subclass Accession number: 63
Subclass: 1.1.2 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 127 Average sequence ID (%) : 14.5 +/- 15.9 Average RMSD (Å) : 0.520 +/- 0.175 Consensus geometry
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Consensus Sequence: | pXcXX |
(φψ)-conformation: | aalbb |
Pattern: | [acfgiklmtv] | x | [adegknqrst] | x | [DEGKNQRS] | x | [dehknpqrst] | [acfilmpvwy] | x | x |
Conservation: | -0.158 | -0.187 | 0.633 | -0.416 | 2.502 | -0.807 | -0.450 | 0.373 | -0.779 | -0.712 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a62_*_31 | 1a62 | - | 42 | 51 | HAKSGEDIFG | HHHTT--EEE | aaaavxxbbb |
1a6q_*_169 | 1a6q | - | 175 | 183 | IQNAGGSVM. | HHHTT--EE. | aaaavxbbb. |
1a79_A_142 | 1a79 | A | 151 | 160 | AHSVRKKLLI | HHHTT-EEEE | aaaalbxbbb |
1amf_*_14 | 1amf | - | 25 | 34 | KKEKGVDVVS | HHHH--EEEE | aaaavxxbbb |
1atg_*_12 | 1atg | - | 23 | 32 | AKQTGHAVVI | HHHH---EEE | aaaavxbbbx |
1auk_*_197 | 1auk | - | 212 | 221 | AQRQDRPFFL | HHHTT--EEE | aaaalbxbbx |
1avq_A_75 | 1avq | A | 93 | 101 | EFTSGVNVT. | HHHH---EE. | aaaavbxbb. |
1ax4_A_203 | 1ax4 | A | 213 | 222 | AKQHGIFVVM | HHHHT--EEE | aaaavxxbbx |
1b7g_O_38 | 1b7g | O | 43 | 51 | AHRRGIRIY. | HHHTT--EE. | aaaavxxbb. |
1b8z_A_18 | 1b8z | A | 35 | 44 | ALAKGEKVQI | HHHTT--EEE | aaaavxxbbb |
1bw0_A_196 | 1bw0 | A | 206 | 215 | AEELRLPLFS | HHHHT--EEE | aaaavbxbbb |
1byf_A_36 | 1byf | A | 46 | 55 | TEVKGHDYWV | HHHHT--EEE | aaaavbxbxb |
1chu_A_223 | 1chu | A | 228 | 236 | AWRAGCRVA. | HHHTT--EE. | aaaagxxbb. |
1cjx_A_285 | 1cjx | A | 288 | 297 | LQARGILLDG | HHHHT-EEEE | aaaavxbbbe |
1cnz_A_16 | 1cnz | A | 31 | 40 | RSRFDMRITT | HHHHT--EEE | aaNalxbbbb |
1cp2_A_190 | 1cp2 | A | 197 | 206 | AKELGSQLIH | HHHHT--EEE | aaaavbbxab |
1cv8_*_67 | 1cv8 | - | 74 | 83 | GQTQGRSPQL | HHHTT---EE | aaaavbbxbx |
1cv8_*_90 | 1cv8 | - | 96 | 105 | LTKNNKGIAI | HHHTT--EEE | aaaalbxbxx |
1dkr_A_178 | 1dkr | A | 185 | 194 | ADRLKAPIAI | HHHHT--EEE | aaaavbxbbb |
1dp4_A_87 | 1dp4 | A | 97 | 106 | TAHWRVPLLT | HHHHT--EEE | aaaalbxbbb |
1drk_*_72 | 1drk | - | 78 | 87 | ANQANIPVIT | HHHTT--EEE | aaaavbpbbx |
1e5x_A_194 | 1e5x | A | 203 | 212 | CASAGIPSIV | HHHHT--EEE | aaaavbpbbb |
1ebf_A_153 | 1ebf | A | 159 | 168 | IIQTGDEVEK | HHHHT--EEE | aaaagxbxab |
1eej_A_2 | 1eej | A | 9 | 18 | LAKMGIKSSD | HHHTT--EEE | aaaavxbxab |
1elj_A_232 | 1elj | A | 235 | 244 | VKKAGINFGV | HHHTT--EEE | aaaavxxbbb |
1elu_A_115 | 1elu | A | 125 | 134 | AARFGITYRF | HHHH--EEEE | aaaavxbbbx |
1em8_A_20 | 1em8 | A | 32 | 41 | RWRSGKRVLI | HHHTT--EEE | aaaavxxbbb |
1ez0_A_157 | 1ez0 | A | 162 | 171 | ALAAGCPVIV | HHHHT--EEE | aaaagbxbbx |
1ezv_A_79 | 1ezv | A | 85 | 94 | AAKEGLALSS | HHHTT-EEEE | aaaavbbbbb |
1f0i_A_96 | 1f0i | A | 109 | 118 | SAAKGNSLKV | HHHTT--EEE | aaaavxbbbb |
1f1z_A_140 | 1f1z | A | 153 | 162 | WQQKQIPWFI | HHHTT--EEE | aaaalbwbbb |
1f5m_A_99 | 1f5m | A | 104 | 113 | AASTKETQIV | HHHHTS-EEE | aaaavbxbbb |
1ff9_A_109 | 1ff9 | A | 112 | 120 | AKDAGITVM. | HHHTT-EEE. | aaaavbbbx. |
1gca_*_73 | 1gca | - | 80 | 89 | ARGQNVPVVF | HHHTT--EEE | aaaalxxbbx |
1gs5_A_213 | 1gs5 | A | 225 | 234 | ARTLGRPVDI | HHHHTS-EEE | aaaavbxbbb |
1gud_A_14 | 1gud | A | 27 | 36 | AKTLGVSVDI | HHHHT--EEE | aaaavbbbbb |
1h6d_A_187 | 1h6d | A | 197 | 206 | AKAANKKLMI | HHHHT--EEE | aaaavbxbbx |
1h6d_A_398 | 1h6d | A | 414 | 422 | AARTGRPVN. | HHHHSS-EE. | aaaavbxbx. |
1h7m_A_43 | 1h7m | A | 53 | 62 | ARLSGIPVYE | HHHHT--EEE | aaaavbxbbx |
1hbn_C_74 | 1hbn | C | 75 | 84 | GAKAGDRVRY | HHHHTB-EEE | aaaavxpxbb |
1hh1_A_70 | 1hh1 | A | 80 | 89 | ARKSGGSLFL | HHHHT-EEEE | aaaavxxbbx |
1hsj_A_17 | 1hsj | A | 28 | 37 | EKDTGIKVTV | HHHH---EEE | aaaagxxbbx |
1ii5_A_30 | 1ii5 | A | 39 | 48 | AESQKWNSEY | HHHHT--EEE | aaaavxxbbx |
1iir_A_103 | 1iir | A | 113 | 122 | AEKLGIPYFY | HHHHT--EEE | aaaavbxbbb |
1iir_A_252 | 1iir | A | 262 | 271 | IRAHGRRVIL | HHHTT--EEE | aaaavbxbbb |
1iir_A_311 | 1iir | A | 317 | 326 | AARAGAPQIL | HHHHT--EEE | aaaavxpbbb |
1iir_A_40 | 1iir | A | 43 | 52 | LAEVGVPHVP | HHHTT--EEE | aaaavbpbbx |
1in4_A_64 | 1in4 | A | 72 | 81 | ASELQTNIHV | HHHHT--EEE | aaaalbxbbx |
1itw_A_229 | 1itw | A | 243 | 252 | AKKQGVLLSV | HHHHT-EEEE | aaaavbxxbb |
1itw_A_463 | 1itw | A | 477 | 486 | ARATNTPAVF | HHHHT--EEE | aaaalbpbbx |
1ixc_A_202 | 1ixc | A | 210 | 219 | FKHAGIEPRI | HHHTT---EE | aaaavbxxxb |
1j18_A_346 | 1j18 | A | 357 | 366 | ANEKGIVLNG | HHHHT--EEE | aaaavxpbbb |
1j18_A_66 | 1j18 | A | 75 | 84 | VKNAGMKMIP | HHHTT--EEE | aaaavbbbbx |
1j8m_F_140 | 1j8m | F | 149 | 157 | GQQIGVPVY. | HHHHT--EE. | aaaavbxbx. |
1j8m_F_255 | 1j8m | F | 262 | 271 | VAATGATIKF | HHTTT--EEE | aaaavxxxab |
1jbw_A_202 | 1jbw | A | 212 | 221 | VATTGSQWLR | HHHHT--EEE | aaaavxxbbb |
1jce_A_293 | 1jce | A | 298 | 307 | QKETGISVIR | HHHHSS-EEE | aaaavbxbbx |
1jdp_A_92 | 1jdp | A | 102 | 111 | ASHWDLPMLS | HHHHT--EEE | aaaavbwbbb |
1jet_A_369 | 1jet | A | 383 | 392 | KKNLGVNVNL | HHHH--EEEE | aaaavxbbbx |
1jf9_A_128 | 1jf9 | A | 134 | 143 | CARVGAELRV | HHHHT-EEEE | aaaavbbxxb |
1jj2_M_20 | 1jj2 | M | 26 | 35 | LLKSGKPRLV | HHHT-S-EEE | aaaavbxxxx |
1jo0_A_57 | 1jo0 | A | 68 | 77 | VRETKAAQVQ | HHHH--EEEE | aaaavxxxab |
1js1_X_125 | 1js1 | X | 131 | 140 | IQHSGRPVFS | HHHSSS-EEE | aaaavbwbbx |
1jvw_A_105 | 1jvw | A | 105 | 114 | SRERGKPTTF | HHHHTS-EEE | aaaavbxbxb |
1jyk_A_67 | 1jyk | A | 69 | 78 | KEKYGVRLVF | HHHH--EEEE | aaaavxbbbx |
1k87_A_342 | 1k87 | A | 360 | 369 | ARQYDIGINI | HHHHT--EEE | aaaalbxbbx |
1k87_A_410 | 1k87 | A | 421 | 430 | ATRSRRRLMI | HHHTTS-EEE | aaaalbbxxb |
1k9j_A_309 | 1k9j | A | 319 | 328 | TSRSNRFSWM | HHHHT--EEE | aaaalbxbxb |
1khd_A_103 | 1khd | A | 110 | 119 | AASCGAKVAK | HHHHT--EEE | aaaagxxbbx |
1lh0_A_1166 | 1lh0 | A | 1171 | 1180 | ERDYGCKVIS | HHHH--EEEE | aaaalbbxxb |
1ltz_A_80 | 1ltz | A | 88 | 97 | MAATGWKIVA | HHHHS-EEEE | aaaavxbxbx |
1lv7_A_201 | 1lv7 | A | 209 | 218 | AGEAKVPFFT | HHHHT--EEE | aaaalbxbbb |
1lwd_A_186 | 1lwd | A | 200 | 209 | AIQKKWPLYM | HHHHT--EEE | aaaavbxbbb |
1lwd_A_236 | 1lwd | A | 239 | 248 | FDKYKIWYEH | HHHTT--EEE | aaaalbbbbx |
1lzl_A_144 | 1lzl | A | 144 | 153 | AEELGIDPSR | HHHHTEEEEE | aaaavbxaab |
1m1n_A_163 | 1m1n | A | 171 | 180 | GAELSKTIVP | HHHHT--EEE | aaaalbxbbw |
1m1n_A_276 | 1m1n | A | 287 | 296 | EEKYGIPWME | HHHH---EEE | aaaavxxbbx |
1m1n_B_234 | 1m1n | B | 244 | 253 | LSEMGVGYSL | HHHHT--EEE | aaaavxxbbx |
1m2o_A_355 | 1m2o | A | 362 | 371 | TDSTGGVLLL | HHHHT--EEE | aaaavxxbbb |
1m6s_A_91 | 1m6s | A | 93 | 102 | AVLSGVMPHP | HHHT--EEEE | aaaavbbxbw |
1m7y_A_175 | 1m7y | A | 185 | 194 | AEKRNLRVKG | HHHTT--EEE | aaaavbxxae |
1msk_*_1157 | 1msk | - | 1158 | 1165 | EKHTGMKL.. | HHHH--EE.. | aaaavxbb.. |
1n2z_A_91 | 1n2z | A | 97 | 106 | LASLGIKVMW | HHHHT--EEE | aaaagxxbbx |
1n62_B_279 | 1n62 | B | 288 | 297 | SIVLGVPVKW | HHHHSS-EEE | aaaavbxbxb |
1nbw_B_19 | 1nbw | B | 29 | 38 | LEEQGVPCQT | HHHTT--EEE | aaaavbpbbx |
1nnf_A_10 | 1nnf | A | 21 | 30 | EQETGIKVTL | HHHS---EEE | aaaavxxbbx |
1np6_A_20 | 1np6 | A | 31 | 40 | LCARGIRPGL | HHHTT--EEE | aaaavxbxbb |
1nu0_A_71 | 1nu0 | A | 84 | 93 | HGRFGVEVKL | HHHH---EEE | aaaavxxbbx |
1o20_A_126 | 1o20 | A | 135 | 144 | ALKSGNTILL | HHHTT--EEE | aaaavbxbbb |
1o4s_A_181 | 1o4s | A | 191 | 200 | AKKRNFYIIS | HHHHT-EEEE | aaaalbxbbb |
1o57_A_142 | 1o57 | A | 149 | 158 | ASYLNVPVVI | HHHHT--EEE | aaaavbxbbb |
1o58_A_63 | 1o58 | A | 72 | 81 | GAKRGHRVIL | HHHHT--EEE | aaaavbxbbb |
1o5z_A_202 | 1o5z | A | 212 | 221 | ARKKSSRMYV | HHHHT--EEE | aaaalxxbbb |
1o63_A_110 | 1o63 | A | 117 | 126 | CESKGWHCRI | HHHHT--EEE | aaaavxxbbx |
1o98_A_95 | 1o98 | A | 104 | 113 | VKQHGTSLHL | HHHHT--EEE | aaaavbbbbb |
1obr_*_227 | 1obr | - | 241 | 250 | AQTNGYTPQQ | HHHH--EEEE | aaaavxbxbx |
1oj4_A_142 | 1oj4 | A | 144 | 153 | VFVRGHAAFA | HHHH-B-EEE | aaaavbpbxb |
1okk_D_266 | 1okk | D | 270 | 279 | VRTLKVPIKF | HHHH---EEE | aaaavxxxab |
1omh_A_189 | 1omh | A | 204 | 213 | LQKLGYQLRY | HHHTT--EEE | aaaavxbbbx |
1oth_A_227 | 1oth | A | 237 | 246 | AKENGTKLLL | HHHHT--EEE | aaaavbbbbb |
1owf_A_20 | 1owf | A | 37 | 46 | ALENGEQVKL | HHHTT--EEE | aaaavxxbbb |
1owf_B_19 | 1owf | B | 36 | 45 | TLAQGERIAI | HHHTT--EEE | aaaavbxbbb |
1p1j_A_303 | 1p1j | A | 309 | 318 | AEHEGTFIAG | HHHHT--EEE | aaaavbxbbe |
1pb7_A_66 | 1pb7 | A | 75 | 84 | ARTMNFTYEV | HHHHT--EEE | aaaalbbbbb |
1pfk_A_227 | 1pfk | A | 235 | 244 | EKETGRETRA | HHHHSS-EEE | aaaavbxbbb |
1pq4_A_247 | 1pq4 | A | 250 | 259 | ARDYNLVQIP | HHHTT-EEEE | aaaalbbxbx |
1psw_A_199 | 1psw | A | 209 | 218 | LIDEGYQVVL | HHHTT--EEE | aaaagbbbbb |
1psz_A_260 | 1psz | A | 266 | 275 | SQDTNIPIYA | HHHHT--EEE | aaaavxxxab |
1pvy_A_196 | 1pvy | A | 203 | 212 | AEKHNLIYLS | HHHTT--EEE | aaaalbxbbb |
1pwb_A_274 | 1pwb | A | 284 | 292 | VVAKNEAAF. | HHHHT--EE. | aaaalbxbx. |
1pzx_A_65 | 1pzx | A | 75 | 84 | YAKENRPCLY | HHHTT--EEE | aaaalxwbbb |
1q0s_A_187 | 1q0s | A | 200 | 209 | LNDRGIKFGQ | HHHHT--EEE | aaaavxxbbb |
1q35_A_16 | 1q35 | A | 23 | 32 | EKDTGIKVNI | HHHH--EEEE | aaaavxxbxb |
1q35_A_256 | 1q35 | A | 263 | 270 | AELNHEYP.. | HHHH--EE.. | aaaavxxp.. |
1q9i_A_344 | 1q9i | A | 349 | 357 | AENAGGALK. | HHHTT--EE. | aaaagxxbb. |
1qb7_A_87 | 1qb7 | A | 91 | 100 | AVELEIPFVL | HHHHT--EEE | aaaavbxbbb |
1qlt_A_80 | 1qlt | A | 90 | 99 | ANKFSFPLWP | HHHHT--EEE | aaaalbwbbw |
1qmh_A_50 | 1qmh | A | 60 | 68 | TEICGATVE. | HHHHT-EEE. | aaaalxbbb. |
1qxy_A_36 | 1qxy | A | 47 | 54 | FEEYGAIS.. | HHHHT-EE.. | aaaavbbp.. |
1r0v_A_272 | 1r0v | A | 282 | 291 | AQNVRKRMVF | HHHTT-EEEE | aaaalbxxbb |
1r89_A_18 | 1r89 | A | 35 | 44 | LDELGVEYVF | HHHHT--EEE | aaaavxxbbx |
1ro2_A_42 | 1ro2 | A | 50 | 59 | MLEHGFNIIP | HHHTT---EE | aaaavbxbbx |
1sdo_A_97 | 1sdo | A | 104 | 113 | IEAAGKEALK | HHHTT---EE | aaaavbxbbx |
1set_A_288 | 1set | A | 306 | 315 | LRLLELPYRL | HHHTT--EEE | aaaalbwbbb |
1t7p_A_39 | 1t7p | A | 49 | 58 | EVARGGLIVF | HHHTT--EEE | aaaavxbbbb |
1ua4_A_70 | 1ua4 | A | 80 | 89 | SIRRGKAAEL | HHHHT--EEE | aaaavbxbbb |
1urs_A_257 | 1urs | A | 260 | 269 | IEKAKIDFGV | HHHTT--EEE | aaaavxxxbb |
1usu_A_488 | 1usu | A | 491 | 500 | LKAKNFEVLF | HHHTT--EEE | aaaavxxbxx |
1uv7_A_88 | 1uv7 | A | 96 | 105 | TRQFNIELIR | HHHHT--EEE | aaaavxxxab |
1uxy_*_26 | 1uxy | - | 36 | 45 | ATAEGQPVLI | HHHTT--EEE | aaaavxxbbx |
1v39_*_73 | 1v39 | - | 82 | 91 | FYNLGVIIKW | HHHTT---EE | aaaavxxbbb |
1v8a_A_69 | 1v8a | A | 82 | 91 | ANELGKPIVL | HHHHT--EEE | aaaavxxbbb |
1vgy_A_266 | 1vgy | A | 277 | 286 | LDKHGVQYDL | HHHTT--EEE | aaaavxbbbb |
1vhm_A_92 | 1vhm | A | 97 | 106 | AVARNQVQRI | HHHHTS-EEE | aaaalbpbbb |
1vhx_A_71 | 1vhx | A | 84 | 93 | ETTYNVPVVL | HHHH-S-EEE | aaaalbpbbx |
1vjl_A_113 | 1vjl | A | 120 | 129 | AVKTGAPIFV | HHHHT--EEE | aaaavxxbbb |
1vk3_A_116 | 1vk3 | A | 126 | 135 | GNSIGVPTVG | HHHHT--EEE | aaaavbxxab |
1vk3_A_462 | 1vk3 | A | 467 | 476 | CEFSGVPVAS | HHHHT--EEE | aaaavxxxab |
1wdn_A_27 | 1wdn | A | 36 | 45 | AKELKLDYEL | HHHHT--EEE | aaaavbbbbx |
1zin_*_13 | 1zin | - | 21 | 30 | VAAYGIPHIS | HHHH---EEE | aaaavbxbbb |
2bc2_A_61 | 2bc2 | A | 72 | 81 | EKKFQKRVTD | HHHHTS-EEE | aaaalbxxab |
3gcb_*_304 | 3gcb | - | 314 | 323 | RLQNNKAVFF | HHHTT--EEE | aaaavbxbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1ax4_A_203 | 1ax4 | A | LPAPYRIDOXAL 5-PHOSPHATE BINDING SITE. | M - 222 |
1gud_A_14 | 1gud | A | ZN3ZN BINDING SITE FOR CHAIN A | D - 35 |
1oj4_A_142 | 1oj4 | A | AC5CL BINDING SITE FOR CHAIN A | R - 147 |
1qmh_A_50 | 1qmh | A | RB1CITRATE BINDING SITE THAT IS INTERPRETED AS A PUTATIVE RNA BINDING SITE | Q - 51 |
Clusters included in this Subclass |
CLUSTER: HE.2.15 |
CLUSTER: HE.2.2 |
CLUSTER: HE.3.3 |
CLUSTER: HE.3.7 |
CLUSTER: HE.3.89 |
CLUSTER: HE.4.104 |
CLUSTER: HE.4.3 |
CLUSTER: HE.4.36 |
CLUSTER: HE.5.116 |
CLUSTER: HE.5.3 |