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Information on SUBCLASS 4.17.1
Subclass Accession number: 6303
Subclass: 4.17.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 33.5 +/- 32.8
Average RMSD (Å) : 0.825 +/- 0.183

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 225-270
Consensus Sequence: XXXGpGhX
(φψ)-conformation: bbpgaebb
Pattern: [ansv][KLV]xxx[GK][HKQR][G][HILV]x[ACVW][fgit][aeg]
Conservation:-0.553-0.046-0.720-0.755-0.9391.1930.3982.682-0.0240.125-0.026-0.815-0.521
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1eax_A_301eax   A3244SLHALGQGHICGAEEEETTTEEEEEEbbbxpvaexabbb
1jce_A_141jce   A1628LVFLRGKGIVVNEEEEETTTEEEEEEbbbbpgaexabbb
1jv5_B_3341jv5   B337349VKLRPGQGLEWIGEEE-TTS-EEEEEbbbbpvaexbxae
1o7f_A_3831o7f   A385397NVVIYGKGVVCTLEEEETTTEEEEEEbbbbpvaexabbb
1oaq_H_321oaq   H3749VKQRPGRGLEWIGEEE-TTS-EEEEEbbbbpvaebbxae
1pvt_A_1861pvt   A186198AVLWDKHGVVAFGEEEETTS-EEEEEbbxxpvaebbbbe
1q0x_H_331q0x   H3749VKQRPGHGLEWIGEEE-TTS-EEEEEbbbbpvaebbxae
2cgr_H_332cgr   H3749VKERPGHGLEWIGEEE-TTS-EEEEEbbbbpgaebbxae
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jce_A_141jce   A     MSESELENOMETHIONINE T - 15
1jce_A_141jce   A     MSESELENOMETHIONINE F - 18
1jce_A_141jce   A     MSESELENOMETHIONINE R - 20
1jce_A_141jce   A     MSESELENOMETHIONINE P - 29
1q0x_H_331q0x   H     PG4TETRAETHYLENE GLYCOL W - 33
1q0x_H_331q0x   H     PG4TETRAETHYLENE GLYCOL E - 35
1q0x_H_331q0x   H     PG4TETRAETHYLENE GLYCOL E - 50
2cgr_H_332cgr   H     GASN-(P-CYANOPHENYL)-N'-DIPHENYLMETHYL-GUANIDINE-ACETIC ACID W - 33
2cgr_H_332cgr   H     GASN-(P-CYANOPHENYL)-N'-DIPHENYLMETHYL-GUANIDINE-ACETIC ACID E - 35
2cgr_H_332cgr   H     GASN-(P-CYANOPHENYL)-N'-DIPHENYLMETHYL-GUANIDINE-ACETIC ACID E - 50
2cgr_H_332cgr   H     GASN-(P-CYANOPHENYL)-N'-DIPHENYLMETHYL-GUANIDINE-ACETIC ACID L - 52

Clusters included in this Subclass
CLUSTER: HA.2.196
CLUSTER: HA.4.164
CLUSTER: HA.5.161
CLUSTER: HA.6.115