Information on SUBCLASS 4.17.1 |
Subclass Accession number: 6303
Subclass: 4.17.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 33.5 +/- 32.8 Average RMSD (Å) : 0.825 +/- 0.183 Consensus geometry
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Consensus Sequence: | XXXGpGhX |
(φψ)-conformation: | bbpgaebb |
Pattern: | [ansv] | [KLV] | x | x | x | [GK] | [HKQR] | [G] | [HILV] | x | [ACVW] | [fgit] | [aeg] |
Conservation: | -0.553 | -0.046 | -0.720 | -0.755 | -0.939 | 1.193 | 0.398 | 2.682 | -0.024 | 0.125 | -0.026 | -0.815 | -0.521 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1eax_A_30 | 1eax | A | 32 | 44 | SLHALGQGHICGA | EEEETTTEEEEEE | bbbxpvaexabbb |
1jce_A_14 | 1jce | A | 16 | 28 | LVFLRGKGIVVNE | EEEETTTEEEEEE | bbbbpgaexabbb |
1jv5_B_334 | 1jv5 | B | 337 | 349 | VKLRPGQGLEWIG | EEE-TTS-EEEEE | bbbbpvaexbxae |
1o7f_A_383 | 1o7f | A | 385 | 397 | NVVIYGKGVVCTL | EEEETTTEEEEEE | bbbbpvaexabbb |
1oaq_H_32 | 1oaq | H | 37 | 49 | VKQRPGRGLEWIG | EEE-TTS-EEEEE | bbbbpvaebbxae |
1pvt_A_186 | 1pvt | A | 186 | 198 | AVLWDKHGVVAFG | EEEETTS-EEEEE | bbxxpvaebbbbe |
1q0x_H_33 | 1q0x | H | 37 | 49 | VKQRPGHGLEWIG | EEE-TTS-EEEEE | bbbbpvaebbxae |
2cgr_H_33 | 2cgr | H | 37 | 49 | VKERPGHGLEWIG | EEE-TTS-EEEEE | bbbbpgaebbxae |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1jce_A_14 | 1jce | A | MSESELENOMETHIONINE | T - 15 |
1jce_A_14 | 1jce | A | MSESELENOMETHIONINE | F - 18 |
1jce_A_14 | 1jce | A | MSESELENOMETHIONINE | R - 20 |
1jce_A_14 | 1jce | A | MSESELENOMETHIONINE | P - 29 |
1q0x_H_33 | 1q0x | H | PG4TETRAETHYLENE GLYCOL | W - 33 |
1q0x_H_33 | 1q0x | H | PG4TETRAETHYLENE GLYCOL | E - 35 |
1q0x_H_33 | 1q0x | H | PG4TETRAETHYLENE GLYCOL | E - 50 |
2cgr_H_33 | 2cgr | H | GASN-(P-CYANOPHENYL)-N'-DIPHENYLMETHYL-GUANIDINE-ACETIC ACID | W - 33 |
2cgr_H_33 | 2cgr | H | GASN-(P-CYANOPHENYL)-N'-DIPHENYLMETHYL-GUANIDINE-ACETIC ACID | E - 35 |
2cgr_H_33 | 2cgr | H | GASN-(P-CYANOPHENYL)-N'-DIPHENYLMETHYL-GUANIDINE-ACETIC ACID | E - 50 |
2cgr_H_33 | 2cgr | H | GASN-(P-CYANOPHENYL)-N'-DIPHENYLMETHYL-GUANIDINE-ACETIC ACID | L - 52 |
Clusters included in this Subclass |
CLUSTER: HA.2.196 |
CLUSTER: HA.4.164 |
CLUSTER: HA.5.161 |
CLUSTER: HA.6.115 |