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Information on SUBCLASS 4.1.11
Subclass Accession number: 631
Subclass: 4.1.11 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 7.3 +/- 8.5
Average RMSD (Å) : 0.571 +/- 0.170

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: hpXXpXXh
(φψ)-conformation: bbaaalbp
Pattern: [filtv]x[glmtv]xxx[HIVY][ADNR]x[agstv][EKRSTY][DEGKRS][agkrs][fpvy]x[acfkl]x
Conservation:0.225-0.485-0.505-0.860-0.586-0.8322.4372.364-0.7280.2900.3150.484-0.137-0.588-0.149-0.471-0.774
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aoc_A_1431aoc   A146162VVRLVTYNLEKDGFLCEEEEEEEEETTTTEEEEEbbbbxbbxaaalbxbxb
1ckm_A_1261ckm   A128144FDGELCVDIVEKKFAFVEEEEEEEETTTTEEEEEbbbbxbbxaaalbxbbb
1jce_A_2231jce   A223239ETTVSGIDLSTGLPRKLEEEEEEEETTTTEEEEEbbbbbbbxaaavbwbbb
1jj2_A_391jj2   A4157TVVDIEHDPARSAPVAAEEEEEEEETTTTEEEEEbxabbbxbaaalbwbbx
1mp2_A_561mp2   A5773IPMVYQYRHTYGRRLWEEEEEEEEETTTTEEEEEbxbbbbxbaaavbxbxb
1vhz_A_591vhz   A6076LILIREYAVGTESYELGEEEEEEEETTTTEEEEExbbbbbxbaaalbxxbe
2scu_B_1042scu   B108124LYLGAVVDRSSRRVVFMEEEEEEEETTTTEEEEEbbbbbbxxaaavbxbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ckm_A_1261ckm   A     GTPGUANOSINE-5'-TRIPHOSPHATE D - 129
1ckm_A_1261ckm   A     GTPGUANOSINE-5'-TRIPHOSPHATE G - 130
1ckm_A_1261ckm   A     GTPGUANOSINE-5'-TRIPHOSPHATE E - 131
1ckm_A_1261ckm   A     GTPGUANOSINE-5'-TRIPHOSPHATE F - 146

Clusters included in this Subclass
CLUSTER: HA.4.45