Information on SUBCLASS 4.51.1 |
Subclass Accession number: 6338
Subclass: 4.51.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation SCOP : 50474 (>75 %) 50475 (>75 %) 50482 (>75 %) |
Number of loops: 2 Average sequence ID (%) : 26.7 +/- 0.0 Average RMSD (Å) : 0.300 +/- 0.000 Consensus geometry
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Consensus Sequence: | hShDPPhh |
(φψ)-conformation: | ababwwbb |
Pattern: | [NT] | [MT] | [GP] | [LV] | [S] | [AI] | [D] | [P] | [P] | [LV] | [FV] | [AG] | [FV] | [AS] | x |
Conservation: | -0.215 | -0.603 | -0.474 | -0.344 | 0.431 | -0.861 | 1.464 | 1.980 | 1.980 | -0.344 | -0.603 | -0.344 | -0.603 | -0.344 | -1.119 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1eje_A_49 | 1eje | A | 49 | 63 | TMPVSIDPPVVAFAS | EEEEETTTTEEEEEE | bbxababwwbbbbbb |
1usc_A_40 | 1usc | A | 40 | 54 | NTGLSADPPLFGVSI | EEEEETTTTEEEEEE | bbxababwwbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1eje_A_49 | 1eje | A | FMNFLAVIN MONONUCLEOTIDE | T - 49 |
1eje_A_49 | 1eje | A | FMNFLAVIN MONONUCLEOTIDE | A - 62 |
1eje_A_49 | 1eje | A | FMNFLAVIN MONONUCLEOTIDE | S - 63 |
1usc_A_40 | 1usc | A | FMNFLAVIN MONONUCLEOTIDE | N - 40 |
1usc_A_40 | 1usc | A | FMNFLAVIN MONONUCLEOTIDE | S - 53 |
1usc_A_40 | 1usc | A | ACTACETATE ION | S - 53 |
1usc_A_40 | 1usc | A | FMNFLAVIN MONONUCLEOTIDE | I - 54 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1usc_A_40 | 1usc | A | AC1FMN BINDING SITE FOR CHAIN A | S - 53 |
1usc_A_40 | 1usc | A | AC1FMN BINDING SITE FOR CHAIN A | I - 54 |
Clusters included in this Subclass |
CLUSTER: HA.3.288 |