Information on SUBCLASS 5.1.5 |
Subclass Accession number: 6344
Subclass: 5.1.5 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 37 Average sequence ID (%) : 14.6 +/- 16.1 Average RMSD (Å) : 0.551 +/- 0.226 Consensus geometry
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Consensus Sequence: | XXpXXGpXX |
(φψ)-conformation: | bbpaagpbb |
Pattern: | x | x | x | [dgnrst] | x | [adegknrs] | [dgnt] | [dehknqrstw] | x | [afgikltv] | x |
Conservation: | -0.453 | -0.688 | -0.444 | 0.453 | -0.226 | 0.003 | 2.851 | -0.018 | -0.545 | -0.404 | -0.528 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a88_A_2 | 1a88 | A | 2 | 12 | TVTTSDGTNIF | EEE-TTS-EEE | bbxxaavxxbx |
1a8q_*_2 | 1a8q | - | 2 | 12 | ICTTRDGVEIF | EEE-TTS-EEE | bbxxaavxxbx |
1bco_*_543 | 1bco | - | 545 | 555 | YCYTLDGRFIC | EEE-TTS-EEE | bxbxaavxxab |
1bqb_A_2 | 1bqb | A | 6 | 16 | TGKGVLGDTKD | EEE-TTS-EEE | bbxxaavxbbx |
1cy9_A_218 | 1cy9 | A | 225 | 235 | STTTPSGEALA | EEE-TTS-EEE | xbbxaagxxbx |
1e9i_A_9 | 1e9i | A | 10 | 20 | EIIDSRGNPTV | EEE-TTS-EEE | bbbxaavbwbx |
1f89_A_109 | 1f89 | A | 114 | 124 | IIFNEDGKLID | EEE-TTS-EEE | xbbbaagxxab |
1fc6_A_399 | 1fc6 | A | 403 | 413 | VVDLSDGSGVA | EEE-TTS-EEE | bxxbaavxbbx |
1fzc_B_309 | 1fzc | B | 313 | 323 | EMEDWKGDKVK | EEE-TTS-EEE | bbbxaavxbbb |
1fzd_A_704 | 1fzd | A | 708 | 718 | ELEDWAGNEAY | EEE-TTS-EEE | bbbxaavxbbb |
1g5h_A_247 | 1g5h | A | 251 | 261 | DCQDELGRKGS | EEE-TTS-EEE | xbbbaavxxbb |
1g8l_A_346 | 1g8l | A | 353 | 363 | LQRNADGELEV | EEE-TTS-EEE | xbxxaalbxbx |
1gt1_A_98 | 1gt1 | A | 104 | 114 | INVDKHGQTTE | EEE-TT--EEE | bbbxaavxxbb |
1h3q_A_70 | 1h3q | A | 74 | 84 | AFVTAGHMRFI | EEE-TT--EEE | bbbxaavxbbb |
1hrd_A_56 | 1hrd | A | 63 | 73 | PWEDDNGKVHV | EEE-TTS-EEE | wbbxaavxxbb |
1i1n_A_189 | 1i1n | A | 194 | 204 | YDKLQDGSIKM | EEE-TTS-EEE | bbbxaavxbbb |
1i7d_A_220 | 1i7d | A | 227 | 237 | HIVTPADERFT | EEE-TT--EEE | xxbxaavxbbb |
1io1_A_304 | 1io1 | A | 310 | 320 | SYTDNNGKTID | EEE-TTS-EEE | bbbxaavxbbx |
1ix2_A_79 | 1ix2 | A | 86 | 96 | RAVSSDTHPIT | EE--TT---EE | bbbbaavbpbb |
1jc9_A_139 | 1jc9 | A | 144 | 154 | DLKDKENDTRY | EEE-TTS-EEE | bbbxaavxbbb |
1jlr_A_83 | 1jlr | A | 87 | 97 | EVTTPLDVSYH | EEE-TTS-EEE | bbbxaavbxbx |
1jqp_A_49 | 1jqp | A | 49 | 59 | TAYDEVGNSGY | EEE-SSS-EEE | xbbxaavxbbb |
1ju2_A_230 | 1ju2 | A | 234 | 244 | IYRDSNGTPHQ | EEE-TTS-EEE | bbbxaavxwbb |
1kjo_A_4 | 1kjo | A | 9 | 19 | VGRGVLGDQKN | EEE-TTS-EEE | bbbxaavxxbx |
1kjv_A_186 | 1kjv | A | 191 | 201 | LHPRPEGDVTL | EEE-TTSSEEE | bbwbaagbbxx |
1kt7_A_53 | 1kt7 | A | 60 | 70 | RVRLLNNWDVC | EEE-TTS-EEE | xbbxaavxxbx |
1mhc_A_186 | 1mhc | A | 191 | 201 | HHPRPKGDVTL | EEE-TTS-EEE | bbxxaagxbxb |
1mnn_A_297 | 1mnn | A | 299 | 309 | ELALKNGSKGM | EEE-SSSSEEE | xbxpaavxxpb |
1o1z_A_31 | 1o1z | A | 36 | 46 | VRLSKDGKVVV | EEE-TTS-EEE | bbbxaavxxbx |
1p1j_A_114 | 1p1j | A | 117 | 127 | LGIDAEGNDVY | EEE-TTS-EEE | aebxaavbpbb |
1q2b_A_13 | 1q2b | A | 17 | 27 | QKCSSGGTCTQ | EEE-TTS-EEE | bbbbaagbbbx |
1qau_A_104 | 1qau | A | 109 | 119 | TTFTGDGTPKT | EEE-TT--EEE | bbbxaavxwbx |
1qo3_A_186 | 1qo3 | A | 191 | 201 | HHRRPEGDVTL | EEE-TTSSEEE | bbxbaagxbxx |
1r18_A_195 | 1r18 | A | 200 | 210 | YDKDANGKVEM | EEE-TTS-EEE | bbbxaavxbbb |
1rvk_A_11 | 1rvk | A | 17 | 27 | RHSDSAGHAHP | EEE-TTS-EEE | xbbxaavxxbx |
1uyr_A_1537 | 1uyr | A | 1542 | 1552 | LIEDENGELTE | EEE-TTS-EEE | bbxxaavxxbx |
3rp2_A_30 | 3rp2 | A | 34 | 44 | DIVTEKGLRVI | EEE-TTS-EEE | bbxxaavbxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gt1_A_98 | 1gt1 | A | PRZPRZ BINDING SITE FOR CHAIN A | A - 101 |
1gt1_A_98 | 1gt1 | A | PRZPRZ BINDING SITE FOR CHAIN A | N - 103 |
1gt1_A_98 | 1gt1 | A | PRZPRZ BINDING SITE FOR CHAIN A | T - 116 |
1gt1_A_98 | 1gt1 | A | PRZPRZ BINDING SITE FOR CHAIN A | E - 117 |
Clusters included in this Subclass |
CLUSTER: HA.4.203 |
CLUSTER: HA.4.34 |
CLUSTER: HA.5.214 |
CLUSTER: HA.5.33 |
CLUSTER: HA.6.23 |
CLUSTER: HA.6.54 |