Information on SUBCLASS 5.4.3 |
Subclass Accession number: 6364
Subclass: 5.4.3 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 11 Average sequence ID (%) : 17.0 +/- 17.1 Average RMSD (Å) : 0.582 +/- 0.392 Consensus geometry
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Consensus Sequence: | XXpppGXXX |
(φψ)-conformation: | bbpaalpbb |
Pattern: | [afgiklt] | x | [DENQSTY] | [dekrt] | [DEHKNY] | [EGN] | x | [fiktv] | x |
Conservation: | -0.763 | -0.777 | 0.269 | 0.022 | 0.749 | 2.206 | -0.913 | -0.106 | -0.686 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1acc_*_639 | 1acc | - | 646 | 654 | IEDTEGLKE | EE-TTS-EE | bbxaavxbb |
1e4e_A_286 | 1e4e | A | 294 | 302 | FLQDNGRIV | EE-TT--EE | bbxaavxxb |
1em2_A_260 | 1em2 | A | 263 | 271 | KNNEYGDTV | EE-TT--EE | bbbaavxbb |
1j18_A_479 | 1j18 | A | 485 | 493 | IKSKDGTVK | EE-TTS-EE | bbxaavxxa |
1kb0_A_361 | 1kb0 | A | 363 | 371 | GYDKHGKPI | EE-TTS-EE | ebxaavbxx |
1kxr_A_262 | 1kxr | A | 262 | 270 | AITFKNLVR | EE-TTS-EE | bxbaalbbx |
1lci_*_418 | 1lci | - | 425 | 433 | YWDEDEHFF | EE-TT--EE | bbxaavxxb |
1mdb_A_409 | 1mdb | A | 416 | 424 | RLTRDGYIV | EE-TTS-EE | bbxaavxbb |
1qmh_A_326 | 1qmh | A | 327 | 335 | LIETDGVTR | EEE-SS-EE | bbxaavbbx |
1ry2_A_555 | 1ry2 | A | 562 | 570 | AKDKDGYIW | EE-TT--EE | bbxaavpbb |
1uis_A_88 | 1uis | A | 94 | 102 | TRYEDGGVF | EEETTS-EE | bbxaagxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1e4e_A_286 | 1e4e | A | AC1PHY BINDING SITE FOR CHAIN A | R - 290 |
Clusters included in this Subclass |
CLUSTER: HA.4.55 |