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Information on SUBCLASS 5.4.5
Subclass Accession number: 6366
Subclass: 5.4.5 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 16.1 +/- 14.7
Average RMSD (Å) : 0.733 +/- 0.288

Consensus geometry
d (Å): 3 delta (°): 45-90 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: XXppXGpXh
(φψ)-conformation: bbpaalpbb
Pattern: [adest]x[dt][ns]x[G][ENQRT]x[flvy]x[aers]x
Conservation:-0.444-0.2320.0360.292-0.6963.0250.196-0.419-0.321-0.592-0.376-0.469
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1eag_A_2411eag   A243254TQDSNGNSFYEVEE-TTS-EEEEEbbxaavxxbxxb
1ftp_A_721ftp   A7485EETLDGRKVKSTEE-TTS-EEEEEbbxaavxbbbbb
1gbg_*_391gbg   -4051SMTSLGEMRLSLEE-TTS-EEEEEbbxaavbxbbbb
1oj5_A_3281oj5   A330341FILNDGTMLSAHEE-TTS-EEEEEbbxaavxxbbbb
1uwv_A_171uwv   A2334DLDSFGQGVARHEE-TTSEEEEEEbbxaavxxbbbb
3pvi_A_593pvi   A5970AVDNAGQEYELKEE-TT--EEEEEbbxaavxxbxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gbg_*_391gbg   *     CACALCIUM ION L - 44
1gbg_*_391gbg   *     CACALCIUM ION G - 45
1gbg_*_391gbg   *     CACALCIUM ION E - 46
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1oj5_A_3281oj5   A AC2IOD BINDING SITE FOR CHAIN AH - 341
1oj5_A_3281oj5   A AC2IOD BINDING SITE FOR CHAIN AR - 343
3pvi_A_593pvi   A CA1CATALYTIC RESIDUES-FIRST MONOMERE - 68
3pvi_A_593pvi   A CA1CATALYTIC RESIDUES-FIRST MONOMERK - 70

Clusters included in this Subclass
CLUSTER: HA.4.144
CLUSTER: HA.5.118