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Information on SUBCLASS 5.4.10
Subclass Accession number: 6371
Subclass: 5.4.10 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
SCOP : 50493 (>50 %)  50494 (>50 %)  50603 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 21.1 +/- 27.6
Average RMSD (Å) : 0.867 +/- 0.379

Consensus geometry
d (Å): 3 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: hXXXpGXXh
(φψ)-conformation: bbpaalpbb
Pattern: [KLV][ESY][FI][CFV][GY][IM][HS][HR][GLM]xxx[NQT][G][ASV][HL][ALV][GL][EST]
Conservation:-0.769-0.6880.706-0.4440.1500.7950.8791.348-0.931-0.610-0.988-0.688-0.2003.050-0.5250.176-0.363-0.699-0.200
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bia_*_2831bia   -283301KEIFGISRGIDKQGALLLEEEEEEEEEEE-TTS-EEEExbbxebxaebxaavxxxbb
1lvo_A_1551lvo   A156174LYFVYMHHLELGNGSHVGSEEEEEEEEEE-TTS-EEEExbxabbxabbxaavxbbbb
1q2w_A_1561q2w   A157175VSFCYMHHMELPTGVHAGTEEEEEEEEEE-TTS-EEEExxxabbxabbxaavxbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1lvo_A_1551lvo   A     MPD2-METHYL-2,4-PENTANEDIOL H - 163
1lvo_A_1551lvo   A     MPD2-METHYL-2,4-PENTANEDIOL L - 164
1lvo_A_1551lvo   A     MPD2-METHYL-2,4-PENTANEDIOL E - 165

Clusters included in this Subclass
CLUSTER: HA.4.238