Information on SUBCLASS 5.4.12 |
Subclass Accession number: 6373
Subclass: 5.4.12 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 2 Average sequence ID (%) : 19.0 +/- 0.0 Average RMSD (Å) : 1.000 +/- 0.000 Consensus geometry
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Consensus Sequence: | RVXXchphh |
(φψ)-conformation: | bbpaalpbb |
Pattern: | x | [MV] | x | [V] | [AV] | [G] | [R] | [V] | [LT] | [AE] | [DK] | [AG] | [DT] | [IV] | [AL] | [CI] | [MT] | x | [VY] | x | [AQ] |
Conservation: | -1.188 | 0.166 | -0.995 | 1.133 | -0.414 | 2.680 | 1.907 | 1.133 | -0.608 | -0.608 | -0.221 | -0.028 | -0.221 | 0.746 | -0.801 | 0.166 | -0.414 | -0.608 | -0.221 | -0.995 | -0.608 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e3p_A_180 | 1e3p | A | 183 | 203 | DMVVAGRVLEDGDVAIMMVEA | EEEEEEEE-TTS-EEEEEEEE | bbxbbbbbxaavxxbxabbbb |
1quq_B_66 | 1quq | B | 66 | 86 | IVEVVGRVTAKATILCTSYVQ | EEEEEEEE-TTS-EEEEEEEE | xbbbbebxxaavbbxxabbbb |
Clusters included in this Subclass |
CLUSTER: HA.6.189 |