Information on SUBCLASS 5.5.1 |
Subclass Accession number: 6374
Subclass: 5.5.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 20 Average sequence ID (%) : 13.8 +/- 17.7 Average RMSD (Å) : 0.625 +/- 0.363 Consensus geometry
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Consensus Sequence: | XpXppXpXX |
(φψ)-conformation: | bbaaalpba |
Pattern: | x | x | x | [GILMVW] | [acfilvy] | [cdknrs] | x | [adegknqs] | [DKNSTY] | x | [deknqrsty] | [fiklv] | [aiklmv] | [adgkn] |
Conservation: | -1.416 | -1.256 | -1.151 | 1.492 | -1.021 | 0.147 | -0.245 | 0.714 | 1.783 | -0.016 | 0.115 | 0.480 | 0.796 | -0.423 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1apa_*_66 | 1apa | - | 67 | 80 | ITLMLKRNNLYVMG | EEEEEETTT--EEE | bbbbbxaaNvxxae |
1bob_*_174 | 1bob | - | 176 | 189 | IYWLLNKKTKELIG | EEEEEETTT--EEE | bbbbbxaaavxxab |
1ddz_A_283 | 1ddz | A | 285 | 298 | QGVVYGVGDGKLRD | EEEEE-TTTT--EE | bbbbbbaaNvxxbx |
1evh_A_45 | 1evh | A | 47 | 60 | RVVGRKIQDHQVVI | EEEEEETTT--EEE | bbbbbpaaaUxxab |
1eys_H_178 | 1eys | H | 181 | 194 | YLEVEVAANKKKVL | EEEEEETTT--EEE | bbxbxxaaNlxxbx |
1hkf_A_87 | 1hkf | A | 90 | 103 | WCRIYRPSDNSVSK | EEEEE-TTT--EEE | bxbbbxaaNvxxab |
1j1q_A_61 | 1j1q | A | 62 | 75 | ITLMLRRNNLYVMG | EEEEEETTT--EEE | bbxbbxaaNlxxae |
1jeh_A_408 | 1jeh | A | 409 | 422 | VKILIDSKTERILG | EEEEEETTT-BEEE | bbbbbxaaaUxxab |
1lcs_A_8 | 1lcs | A | 11 | 24 | TWTITNLVTGTKAN | EEEEEETTT--EEE | bbbbbxaaavxxab |
1lp8_A_61 | 1lp8 | A | 63 | 76 | VSLGLRRENLYVVA | EEEEEETTT--EEE | bbbbbxaaNvxxab |
1lvl_*_388 | 1lvl | - | 389 | 402 | VRVVARRDNHLILG | EEEEEETTT-BEEE | bbbbbxaaNUxxab |
1orv_A_75 | 1orv | A | 75 | 88 | NILLFNAEYGNSSI | EEEEEETTT---EE | xxbbxbaaavxxbx |
1qi7_A_60 | 1qi7 | A | 62 | 75 | VSLGLKRDNLYVVA | EEEEEETTT--EEE | bbbbbxaaNvxxab |
1qme_A_288 | 1qme | A | 290 | 303 | TATLVSAKTGEILA | EEEEEETTT-BEEE | bbbbbxaaavxxab |
1ry6_A_213 | 1ry6 | A | 217 | 230 | NIDLKDINKNTSLG | EEEEEETTTTEEEE | xbbxbxaaalbxae |
1s5p_A_148 | 1s5p | A | 150 | 163 | LLKVRCSQSGQVLD | EEEEEETTT--EEE | aabbbxaaavpbbp |
1sqh_A_211 | 1sqh | A | 211 | 224 | SLGICRSDTGELIA | EEEEEETTT--EEE | bbbbbxaaavxxab |
2bbk_H_297 | 2bbk | H | 299 | 312 | FVVVLDAKTGERLA | EEEEEETTT--EEE | bbxbbxaaavxxab |
3eip_A_2 | 3eip | A | 5 | 18 | DLTWFDKSTEDFKG | EEEEEETTT--EEE | bbbbbxaaavxxab |
3lad_A_401 | 3lad | A | 402 | 415 | VKVIADAKTDRVLG | EEEEEETTT-BEEE | bbbbbxaaavxxab |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HA.4.80 |
CLUSTER: HA.6.15 |