Information on SUBCLASS 5.5.5 |
Subclass Accession number: 6378
Subclass: 5.5.5 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.3 (>50 %) 2.3.1 (>50 %) 2.3.1.97 GO : GO:0008415 (>50 %) GO:0016746 (>50 %) GO:0016747 (>50 %) SCOP : 55728 (>50 %) 55729 (>50 %) 55748 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 37.5 +/- 22.6 Average RMSD (Å) : 0.533 +/- 0.153 Consensus geometry
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Consensus Sequence: | pXXpTXXhh |
(φψ)-conformation: | bpaaalppa |
Pattern: | [HL] | [IV] | [G] | [V] | [RY] | [DV] | [IK] | [EQS] | [T] | [GQ] | [KV] | [LP] | [LV] | [AM] | [FG] | [IV] | x | [AN] | x | [P] | [FV] | [TV] | x | [GKQ] |
Conservation: | -0.290 | 0.709 | 2.151 | 0.978 | -0.232 | -0.819 | -0.853 | -0.196 | 1.564 | -0.067 | -0.565 | -0.708 | 0.113 | -0.353 | -0.444 | 0.689 | -0.848 | -0.531 | -1.109 | 2.738 | -0.243 | 0.012 | -0.978 | -0.717 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1iic_A_134 | 1iic | A | 134 | 157 | HIGVRVKETQKLVAFISAIPVTLG | EEEEEETTT--EEEEEEEEEEEEE | bxbbbxaaavxxabbbbbbxbbxb |
1inp_*_183 | 1inp | - | 185 | 208 | LIGVYDIQTGVPLMGVINQPFVSQ | EEEEEETTT--EEEEEEEEEEEEE | bbbbbxaaavxwabbbbbxababb |
1iyk_A_138 | 1iyk | A | 138 | 161 | HVGVRVKSTGKLVAFIAATPVTFK | EEEEEETTT--EEEEEEEEEEEEE | bxbbbxaaavxxabbbbbbwbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1iic_A_134 | 1iic | A | MYATETRADECANOYL-COA | I - 149 |
1iyk_A_138 | 1iyk | A | MYATETRADECANOYL-COA | I - 153 |
Clusters included in this Subclass |
CLUSTER: HA.4.236 |