Logo
Information on SUBCLASS 5.9.2
Subclass Accession number: 6385
Subclass: 5.9.2 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 80.0 +/- -45.8
Average RMSD (Å) : 0.100 +/- 0.000

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 135-180 rho (°): 225-270
Consensus Sequence: DYhDHXDhh
(φψ)-conformation: bbpabaapb
Pattern: [Q][H][D][Y][FL][D][H][HSW][D][IV][IV][G][W][T][R]
Conservation:-0.2431.0000.1710.586-1.2490.1711.000-1.8090.171-0.863-0.8640.1712.244-0.243-0.243
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e43_A_3991e43   A399413QHDYFDHHDIVGWTREEEE--SSSEEEEEEbbbbxabaaxbbbbb
1hvx_A_3991hvx   A399413QHDYLDHSDIIGWTREEEE--SSSEEEEEEbbxbxabaaxbbbbb
1ud2_A_3961ud2   A396410QHDYFDHWDVVGWTREEEE--SSSEEEEEEbbxbxabaaxbbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e43_A_3991e43   A     CACALCIUM ION H - 406
1e43_A_3991e43   A     CACALCIUM ION D - 407
1hvx_A_3991hvx   A     CACALCIUM ION S - 406
1ud2_A_3961ud2   A     GOLGLYCEROL H - 402
1ud2_A_3961ud2   A     GOLGLYCEROL W - 403
1ud2_A_3961ud2   A     GOLGLYCEROL D - 404

Clusters included in this Subclass
CLUSTER: HA.4.267