Information on SUBCLASS 5.9.2 |
Subclass Accession number: 6385
Subclass: 5.9.2 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 80.0 +/- -45.8 Average RMSD (Å) : 0.100 +/- 0.000 Consensus geometry
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Consensus Sequence: | DYhDHXDhh |
(φψ)-conformation: | bbpabaapb |
Pattern: | [Q] | [H] | [D] | [Y] | [FL] | [D] | [H] | [HSW] | [D] | [IV] | [IV] | [G] | [W] | [T] | [R] |
Conservation: | -0.243 | 1.000 | 0.171 | 0.586 | -1.249 | 0.171 | 1.000 | -1.809 | 0.171 | -0.863 | -0.864 | 0.171 | 2.244 | -0.243 | -0.243 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e43_A_399 | 1e43 | A | 399 | 413 | QHDYFDHHDIVGWTR | EEEE--SSSEEEEEE | bbbbxabaaxbbbbb |
1hvx_A_399 | 1hvx | A | 399 | 413 | QHDYLDHSDIIGWTR | EEEE--SSSEEEEEE | bbxbxabaaxbbbbb |
1ud2_A_396 | 1ud2 | A | 396 | 410 | QHDYFDHWDVVGWTR | EEEE--SSSEEEEEE | bbxbxabaaxbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1e43_A_399 | 1e43 | A | CACALCIUM ION | H - 406 |
1e43_A_399 | 1e43 | A | CACALCIUM ION | D - 407 |
1hvx_A_399 | 1hvx | A | CACALCIUM ION | S - 406 |
1ud2_A_396 | 1ud2 | A | GOLGLYCEROL | H - 402 |
1ud2_A_396 | 1ud2 | A | GOLGLYCEROL | W - 403 |
1ud2_A_396 | 1ud2 | A | GOLGLYCEROL | D - 404 |
Clusters included in this Subclass |
CLUSTER: HA.4.267 |