Information on SUBCLASS 5.13.1 |
Subclass Accession number: 6390
Subclass: 5.13.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 11 Average sequence ID (%) : 19.5 +/- 19.4 Average RMSD (Å) : 0.964 +/- 0.311 Consensus geometry
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Consensus Sequence: | pXGXXXXXX |
(φψ)-conformation: | bbeapppbb |
Pattern: | x | [almv] | [qrt] | x | [DG] | [ADNQST] | x | [akt] | x | x | x |
Conservation: | -0.748 | 0.124 | 0.422 | -0.577 | 2.773 | 0.023 | -0.468 | 0.084 | -0.477 | -0.802 | -0.353 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gtf_A_19 | 1gtf | A | 23 | 33 | GLTRGADTRFH | EEE-SSS--EE | xbxxeabbbxa |
1ifr_A_468 | 1ifr | A | 470 | 480 | KRQNGDDPLLT | EEEETTS--EE | bbbbeaxwxbb |
1juh_A_283 | 1juh | A | 284 | 294 | VVQIGDYAATE | EEEETTS--EE | xbbbeaxxpbx |
1juh_A_81 | 1juh | A | 85 | 95 | WAQSGNETQQT | EEEETTS--EE | bbbbeaxxxbb |
1mx1_A_1525 | 1mx1 | A | 1526 | 1536 | YLQIGANTQAA | EEEEESS-EEE | bbxbeabbbxb |
1pz7_A_122 | 1pz7 | A | 124 | 134 | SLQVGNEAPIT | EEEETTS--EE | bbbbeaxxpxb |
1qba_*_151 | 1qba | - | 151 | 161 | YATSGDAKPKM | EEE-TTS--EE | bbbbeapxxbx |
1r0u_A_62 | 1r0u | A | 65 | 75 | VMRSGAVKMNQ | EEEEESSBEEE | bbbbeabbbbx |
1wap_A_19 | 1wap | A | 23 | 33 | GLTRGTDTKFH | EEE-SSS--EE | xbxxeaxbbxa |
2fbj_H_199 | 2fbj | H | 203 | 213 | SVQHDSNPVQE | EEEETTS--EE | bbbxeaxpxbb |
2kin_A_38 | 2kin | A | 38 | 48 | TVVIGQGKPYV | EEEETTS--EE | bbbbeaxxxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gtf_A_19 | 1gtf | A | AC1TRP BINDING SITE FOR CHAIN A | G - 23 |
1gtf_A_19 | 1gtf | A | AC2TRP BINDING SITE FOR CHAIN B | T - 25 |
1gtf_A_19 | 1gtf | A | AC2TRP BINDING SITE FOR CHAIN B | T - 30 |
Clusters included in this Subclass |
CLUSTER: HA.4.91 |
CLUSTER: HA.6.41 |