Information on SUBCLASS 5.16.1 |
Subclass Accession number: 6394
Subclass: 5.16.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 10 Average sequence ID (%) : 26.9 +/- 26.3 Average RMSD (Å) : 0.740 +/- 0.357 Consensus geometry
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Consensus Sequence: | XXXppPhXh |
(φψ)-conformation: | bbapbwpbb |
Pattern: | [acgiw] | [actv] | [itvw] | x | [EGKQST] | [eknt] | [P] | [AIPV] | [kqtwy] | [CFGIV] |
Conservation: | -0.721 | -0.281 | -0.286 | -0.389 | -0.086 | -0.232 | 2.782 | 0.047 | -0.507 | -0.326 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aog_A_364 | 1aog | A | 364 | 373 | SAVFSIPPIG | EEE--SS-EE | bbbaxbwxbb |
1c2a_A_72 | 1c2a | A | 73 | 82 | ICTRSNPPTC | EE-SSSS-EE | bbxaxbwxbb |
1clo_L_84 | 1clo | L | 89 | 98 | QHWSSKPPTF | EE-SSSS-EE | bbbabxwwbb |
1eaq_A_149 | 1eaq | A | 150 | 159 | ITVFTNPPQV | EEE-SSS-EE | bbbaxbwxbb |
1fec_A_363 | 1fec | A | 363 | 372 | CAVFSIPPMG | EEE--SS-EE | bbbaxbwxbb |
1fmk_*_325 | 1fmk | - | 327 | 336 | AVVSEEPIYI | EEE-SSS-EE | bbbapbbxbb |
1ijq_A_509 | 1ijq | A | 512 | 521 | WTDWGTPAKI | EEE-SSS-EE | bxbaxbwxbb |
1mp8_A_486 | 1mp8 | A | 488 | 497 | GVITENPVWI | EEE-SSS-EE | ebbabpwxbb |
1qcf_A_325 | 1qcf | A | 327 | 336 | AVVTKEPIYI | EEE-SSS-EE | bbbabxwxbb |
1qpc_A_303 | 1qpc | A | 305 | 314 | AVVTQEPIYI | EEE-SSS-EE | bbbabxwxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HA.4.83 |
CLUSTER: HA.5.90 |
CLUSTER: HA.6.39 |