Information on SUBCLASS 5.17.1 |
Subclass Accession number: 6395
Subclass: 5.17.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 9 Average sequence ID (%) : 5.8 +/- 8.7 Average RMSD (Å) : 1.011 +/- 0.280 Consensus geometry
|
Consensus Sequence: | XXppcXXXp |
(φψ)-conformation: | bbpapapbb |
Pattern: | x | x | x | [DEKNRST] | [DEKPS] | [DGNQT] | x | x | x | [dekrtw] | x |
Conservation: | -1.000 | -0.704 | -0.431 | 1.143 | 1.605 | 1.504 | -0.384 | -0.655 | -0.792 | -0.377 | -0.910 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1acc_*_134 | 1acc | - | 135 | 145 | YWTDSQNKKEV | EEE-SSS-EEE | bbbxaxaxbbp |
1f1m_A_78 | 1f1m | A | 78 | 88 | KKIKSDVSLDN | EE--SSSS-EE | bbxbabaxxbx |
1fng_A_138 | 1fng | A | 138 | 147 | .LPRDDHLFRK | .EE-SSS-EEE | .xxbaxaxbbb |
1iq8_A_460 | 1iq8 | A | 461 | 471 | VELSKTGMPRQ | EEE-SSS-EEE | bxbxaxaxxax |
1n28_A_68 | 1n28 | A | 68 | 77 | .FSNSGSRITC | .EE-SSSS-EE | .bbbaFaxxbx |
1ng4_A_176 | 1ng4 | A | 176 | 186 | HVERDGEALFI | EEEE-SSSEEE | bbbbaxabxbb |
1ooa_A_279 | 1ooa | A | 283 | 293 | YEEEENGGVWE | EEE-SSS-EEE | bbxxaxaxbxb |
1qql_A_84 | 1qql | A | 87 | 97 | ERLEENHYNTY | EEE-SSS-EEE | xbbxaxaxbbb |
2ctx_*_2 | 2ctx | - | 3 | 13 | CFITPDITSKD | EE-SS--SEEE | bxbxwpabxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1f1m_A_78 | 1f1m | A | ZNZINC ION | S - 82 |
Clusters included in this Subclass |
CLUSTER: HA.5.58 |
CLUSTER: HA.6.91 |
CLUSTER: HA.7.57 |