Information on SUBCLASS 5.33.1 |
Subclass Accession number: 6413
Subclass: 5.33.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 25.0 +/- 33.8 Average RMSD (Å) : 0.725 +/- 0.126 Consensus geometry
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Consensus Sequence: | XXXXXXhhX |
(φψ)-conformation: | bpppgeebb |
Pattern: | [LTY] | [IK] | [IV] | [AER] | [KNPT] | [AKL] | [ADT] | [GNS] | [GS] | [AG] | [FWY] | x |
Conservation: | -0.735 | -0.423 | 1.357 | -0.569 | -0.819 | -1.031 | -0.667 | 0.144 | 1.039 | 0.996 | 1.695 | -0.986 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1coy_*_248 | 1coy | - | 251 | 262 | TKVAPATGSGYS | EEEEE-SSSSEE | abbbpxxgeebx |
1lg7_A_210 | 1lg7 | A | 210 | 221 | LIVEKKASGAWV | EEEEE-TTS-EE | bbbbbxxveMxb |
1lkk_A_175 | 1lkk | A | 181 | 192 | YKIRNLDNGGFY | EEEEE-TTS-EE | bxxxxxpveebb |
1qcf_A_196 | 1qcf | A | 202 | 213 | YKIRTLDNGGFY | EEEEE-TTS-EE | bxbxxxxveebb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1coy_*_248 | 1coy | * | FADFLAVIN-ADENINE DINUCLEOTIDE | H - 248 |
1coy_*_248 | 1coy | * | FADFLAVIN-ADENINE DINUCLEOTIDE | R - 249 |
1coy_*_248 | 1coy | * | FADFLAVIN-ADENINE DINUCLEOTIDE | V - 250 |
1coy_*_248 | 1coy | * | FADFLAVIN-ADENINE DINUCLEOTIDE | T - 251 |
1lkk_A_175 | 1lkk | A | PHSPHOSPHONO GROUP | H - 180 |
1lkk_A_175 | 1lkk | A | PHSPHOSPHONO GROUP | K - 182 |
1qcf_A_196 | 1qcf | A | PTRO-PHOSPHOTYROSINE | H - 201 |
1qcf_A_196 | 1qcf | A | PTRO-PHOSPHOTYROSINE | Y - 202 |
1qcf_A_196 | 1qcf | A | PTRO-PHOSPHOTYROSINE | K - 203 |
Clusters included in this Subclass |
CLUSTER: HA.4.176 |