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Information on SUBCLASS 5.35.1
Subclass Accession number: 6415
Subclass: 5.35.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0003677 (>75 %)  GO:0003700 (>50 %)  GO:0003702 (>75 %)  
SCOP : 55944 (>75 %)  55945 (>75 %)  55946 (>75 %)  
Number of loops: 3

Average sequence ID (%) : 73.3 +/- -30.9
Average RMSD (Å) : 0.267 +/- 0.058

Consensus geometry
d (Å): 5 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: YEPEXFPGh
(φψ)-conformation: bbaaababb
Pattern: [CNS]x[Y][E][P][E]x[F][P][G][LV][I][Y][R][MV]
Conservation:-1.387-1.6361.1060.2091.1060.209-1.4250.6581.1060.658-0.907-0.2401.1060.209-0.773
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ais_A_1271ais   A127141CEYEPEQFPGVIYRVEE--TTT-SSEEEEEbbbbaaababxxbxx
1mp9_A_1311mp9   A131145NMYEPEQFPGLIYRMEE--TTT-SSEEEEEbbbbaaababbbbxx
1qna_A_1411qna   A141155SSYEPELFPGLIYRMEE--TTT-SSEEEEEbbbbaaabaxxxbxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ais_A_1271ais   A     5IU5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE R - 140

Clusters included in this Subclass
CLUSTER: HA.7.129