Information on SUBCLASS 4.2.2 |
Subclass Accession number: 642
Subclass: 4.2.2 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 110 Average sequence ID (%) : 13.8 +/- 14.9 Average RMSD (Å) : 0.462 +/- 0.172 Consensus geometry
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Consensus Sequence: | XpXpcpXX |
(φψ)-conformation: | bbaagppb |
Pattern: | x | x | [adegnqrst] | x | [adegknqrst] | [adegknqs] | [cdehknqrstwy] | x | x | x | x |
Conservation: | -0.753 | -0.330 | 0.740 | -0.225 | 0.844 | 2.414 | 0.139 | -0.483 | -0.579 | -1.012 | -0.756 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1amu_A_455 | 1amu | A | 463 | 473 | HKDHQEQPYLC | EE-TTS-EEEE | bbxaaUxwbxb |
1bu6_O_15 | 1bu6 | O | 20 | 30 | VMDHDANIISV | EE-TTS-EEEE | bbxaavbxabb |
1cqq_A_52 | 1cqq | A | 62 | 72 | LYNKNGIKLEI | EE-TTS-EEEE | xbxaavxxavb |
1cv8_*_119 | 1cv8 | - | 128 | 138 | AKLNNGQEVII | EEETTS-EEEE | bbxaavxbbbx |
1d0n_A_67 | 1d0n | A | 74 | 84 | VQLRNGILQYD | EE-TTS-EEEE | bxxaavxbbbb |
1d4x_G_43 | 1d4x | G | 50 | 60 | VQLRNGNLQYD | EE-TTSSEEEE | bxbaagxxxbb |
1d6a_A_222 | 1d6a | A | 229 | 239 | LVDASGAKWIV | EE-TTS-EEEE | bbxaavxxbxb |
1dd9_A_203 | 1dd9 | A | 208 | 218 | IRDKRGRVIGF | EE-TTS-EEEE | xbxaavxxabb |
1dmg_A_3 | 1dmg | A | 6 | 16 | LLNVKGEKVGT | EE-TTS-EEEE | bbbaavxxaeb |
1e1a_A_174 | 1e1a | A | 180 | 190 | RHMNDGRPYQL | EE-TTS-EEEE | bbxaavxxabb |
1e1o_A_120 | 1e1o | A | 128 | 138 | FKTQTGELSIH | EE-TT--EEEE | bbxaavxxbbx |
1eg7_A_1258 | 1eg7 | A | 1260 | 1270 | VQTLENTPAFI | EEETT--EEEE | bbxaavxwbbb |
1ehd_A_17 | 1ehd | A | 17 | 25 | CCSIWGWCG.. | EEETTS-EE.. | xbxaavbxb.. |
1ehd_A_63 | 1ehd | A | 63 | 71 | CCSVHGWCG.. | EEETTSBEE.. | bxxaavbxb.. |
1ei5_A_486 | 1ei5 | A | 493 | 503 | RRDDKGEITGL | EE-TTS-EEEE | bbxaavxxaeb |
1f1s_A_223 | 1f1s | A | 229 | 239 | ISDKSGKIIKE | EE-TT--EEEE | bbbaavxxabb |
1f1u_A_176 | 1f1u | A | 181 | 191 | IKDSDGVTYAA | EE-TT--EEEE | bbxaavxxabb |
1f5m_A_131 | 1f5m | A | 137 | 147 | IISNDGKTLGV | EE-TTS-EEEE | bxxaavbxaeb |
1f7s_A_66 | 1f7s | A | 74 | 84 | FVTAENCQKSK | EE-TTS-EEEE | bbxaalbxbbb |
1f86_A_29 | 1f86 | A | 34 | 44 | RKAADDTWEPF | EE-TTS-EEEE | bxxaavbxxwa |
1fjs_A_30 | 1fjs | A | 33 | 43 | LINEENEGFCG | EE-TT--EEEE | xbxaavxxabb |
1g0u_1_108 | 1g0u | 1 | 112 | 120 | YVNLLGVTY.. | EEETT--EE.. | bbbaavxbb.. |
1gtm_A_35 | 1gtm | A | 43 | 53 | VEMDDGSVKVF | EE-TTS-EEEE | bxxaavbbbbb |
1gx5_A_369 | 1gx5 | A | 373 | 383 | AHDASGKRVYY | EE-TTS-EEEE | bbxaavxxbxb |
1h16_A_543 | 1h16 | A | 547 | 557 | IRDEDGLAIDF | EE-TTS-EEEE | bbxaavxxabb |
1h3q_A_5 | 1h3q | A | 9 | 19 | IVGHHDNPVFE | EE-TTS-EEEE | bbxaavbxabb |
1h4r_A_220 | 1h4r | A | 224 | 234 | IRNKKGTELLL | EEETT--EEEE | bbxaavxxbbx |
1h6l_A_182 | 1h6l | A | 189 | 199 | NADKNGYISGK | EE-TTSSEEEE | bxxaavbbbbb |
1h6y_A_86 | 1h6y | A | 94 | 104 | YVDGSGTQRYD | EE-TTS-EEEE | bbxaavbxbbb |
1hc7_A_210 | 1hc7 | A | 216 | 226 | ALMKDGKALQA | EE-TTS-EEEE | bbxaavbxbxa |
1hdm_B_5 | 1hdm | B | 12 | 22 | LLDDAGTPKDF | EE-TTS-EEEE | bbxaavxwabb |
1hqz_1_32 | 1hqz | 1 | 36 | 46 | SPNAKKEYEPE | EE-TTS-EEEE | bxxaavxxbpa |
1hrd_A_56 | 1hrd | A | 64 | 74 | WEDDNGKVHVN | EE-TTS-EEEE | bbxaavxxbbb |
1i4u_A_63 | 1i4u | A | 69 | 79 | GIAYDGNLLKR | EEETTS-EEEE | ebxaavxpbbb |
1ifr_A_526 | 1ifr | A | 530 | 540 | LINSTGEEVAM | EE-TTS-EEEE | xbxaavxxabb |
1ihr_A_177 | 1ihr | A | 181 | 191 | DVTPDGRVDNV | EE-TTS-EEEE | bbxaavxxblx |
1iq6_A_108 | 1iq6 | A | 115 | 125 | IFTQGGALAVT | EE-TTS-EEEE | bbxaavxxabb |
1itw_A_433 | 1itw | A | 437 | 447 | VTDESGKLLLE | EEETT--EEEE | bbxaavxxabb |
1ivw_A_59 | 1ivw | A | 64 | 74 | IHDVSGARPQE | EEETTS---EE | bxbaavxpwbb |
1iwm_A_128 | 1iwm | A | 129 | 139 | KLDDQYRLSEI | EE-TTS-EEEE | bbxaalbpabb |
1iwm_A_59 | 1iwm | A | 64 | 74 | LTNPLGSTELE | EE-TTS-EEEE | bbxaagxxabb |
1iyk_A_316 | 1iyk | A | 321 | 331 | VEDENGIITDY | EE-TTS-EEEE | bbxaavxxabb |
1j1t_A_121 | 1j1t | A | 128 | 138 | LRNTSGNEEKF | EEBTTS-EEEE | bxxaavbxbbb |
1j3w_A_31 | 1j3w | A | 34 | 44 | LIDRKGFVLAH | EEETTS-EEEE | bbxaagxxabb |
1j9j_A_182 | 1j9j | A | 190 | 200 | RVSPFGEKYYW | EE-TTS-EEEE | bbxaavxxbbb |
1jet_A_48 | 1jet | A | 49 | 58 | ISDVEGHPSP. | EE-TT--EEE. | bxxaavxwbp. |
1jj2_C_2 | 1jj2 | C | 5 | 15 | IYDLDGNTDGE | EE-TTS-EEEE | xbxaavxpbeb |
1jkm_A_89 | 1jkm | A | 96 | 106 | ILGVDGNEITL | EE-TTS-EEEE | bbxaavxxbxb |
1jof_A_120 | 1jof | A | 125 | 135 | SVSETGKLEKN | EE-TT--EEEE | xbxaavxpabx |
1jof_A_283 | 1jof | A | 288 | 298 | KLRDCGSIEKQ | EE-TTS-EEEE | bbxaagxxabx |
1jov_A_107 | 1jov | A | 114 | 124 | LFSDLNIIEAK | EE-TTS-EEEE | bbxaavbpabb |
1ju3_A_459 | 1ju3 | A | 466 | 476 | DVFPDGRAIAL | EE-TTS-EEEE | bxxaagpbxxa |
1jyk_A_137 | 1jyk | A | 139 | 149 | VYGDDYKVQDI | EE-TT-BEEEE | bbbaavxxabb |
1jz7_A_309 | 1jz7 | A | 315 | 325 | LHTADGTLIEA | EEETTS-EEEE | bbxaagxxabb |
1k0g_A_393 | 1k0g | A | 396 | 406 | YLSFCGNMDTS | EEETTS-EEEE | bbxaagxbbbb |
1kk8_A_244 | 1kk8 | A | 250 | 260 | HFGPTGKIAGA | EE-TTSSEEEE | xbxaavbpaeb |
1kt7_A_114 | 1kt7 | A | 122 | 132 | LLNLDGTCADS | EE-TTSBEEEE | bxxaavxxabb |
1kwg_A_549 | 1kwg | A | 549 | 559 | LTFQDGKGALY | EEETTS-EEEE | bbxaavxxabb |
1lml_*_226 | 1lml | - | 231 | 241 | QTFSDGHPAVG | EE-TTS-EEEE | bbxaavxwabb |
1m98_A_286 | 1m98 | A | 293 | 303 | LLNPENKVFFV | EE-TTS-EEEE | bbxaalbxabb |
1mo9_A_277 | 1mo9 | A | 282 | 292 | EEDANGRVQAV | EE-TTSBEEEE | xbxaavbpabb |
1mrj_*_208 | 1mrj | - | 215 | 225 | LINAQNQRVTI | EE-TTS-EEEE | bbxaavxxbbb |
1n67_A_503 | 1n67 | A | 511 | 521 | GYNSNIIWRSM | EE-TT---EEE | exbaalxxbbb |
1n8j_A_119 | 1n8j | A | 123 | 133 | VVDPQGIIQAI | EE-TTSBEEEE | xbxaavxxabb |
1now_A_180 | 1now | A | 180 | 190 | YQDSYGTFTIN | EE-TTS-EEEE | bbxaavxxbbx |
1npu_A_31 | 1npu | A | 36 | 46 | RLSPSNQTEKQ | EE-TTS-EEEE | bxxaalbxbxa |
1nv8_A_263 | 1nv8 | A | 265 | 275 | LKDSAGKYRFL | EE-TTSSEEEE | bxxaavbxabb |
1o75_A_69 | 1o75 | A | 84 | 94 | TEDSRGRKKWE | EE-TTS-EEEE | bbxaavxbbxb |
1ocv_A_98 | 1ocv | A | 102 | 112 | RFNGAGKVVSM | EE-TTS-EEEE | bbxaavxxabb |
1ofz_A_73 | 1ofz | A | 80 | 90 | CVNKDNILSEF | EE-TT-BEEEE | bbxaalbpbbb |
1oi0_A_106 | 1oi0 | A | 108 | 116 | CYNRKGEEV.. | EEETTS-EE.. | bbxaavxxb.. |
1one_A_4 | 1one | A | 10 | 20 | VYDSRGNPTVE | EE-TTS-EEEE | bbxaavbwbxb |
1onw_A_356 | 1onw | A | 358 | 368 | VMTPELRIEQV | EE-TT--EEEE | bbxaavbxabb |
1osp_O_121 | 1osp | O | 125 | 135 | KFNEKGEVSEK | EE-TTS-EEEE | bbbaavbxabb |
1oxd_A_160 | 1oxd | A | 169 | 179 | HNIEDGSVQLA | EEBTTS-EEEE | bxxaavxbbxb |
1oyg_A_311 | 1oyg | A | 317 | 327 | ELNDDYTLKKV | EE-TTSSEEEE | xbxaavxxabx |
1p1j_A_25 | 1p1j | A | 38 | 48 | TKTASGRFDVT | EE-TTS-EEEE | bbxaavbxxbb |
1pcf_A_80 | 1pcf | A | 89 | 99 | WMDPEGEMKPG | EE-TTS-EEEE | bbxaavxxbxx |
1pfo_*_404 | 1pfo | - | 414 | 424 | SYDKEGNEVLT | EE-TTS-EEEE | bbxaavxxbbb |
1pj5_A_537 | 1pj5 | A | 542 | 552 | LLDHAGGVRSD | EE-TTS-EEEE | bbxaavxxabb |
1pn0_A_82 | 1pn0 | A | 87 | 97 | NPDENGHIRRT | EE-TTS-EEEE | bxxaavbxbxa |
1prx_A_133 | 1prx | A | 136 | 146 | VFGPDKKLKLS | EE-TTSBEEEE | bbxaavxxabb |
1psu_A_107 | 1psu | A | 114 | 124 | IVNQQQKTVAL | EE-TTS-EEEE | bbxaavxxabb |
1pvm_A_154 | 1pvm | A | 157 | 167 | VYNEKGEIKVF | EE-TTS-EEEE | bbbaavxxabb |
1q8i_A_152 | 1q8i | A | 158 | 168 | ETTRHGELYCI | EE-TTS-EEEE | bbxaavxpabb |
1q9i_A_276 | 1q9i | A | 282 | 292 | LKDDKGTVKGI | EE-TTS-EEEE | xbxaavxxaeb |
1qfm_A_435 | 1qfm | A | 442 | 452 | YPSKDGTKIPM | EE-TTS-EEEE | bxxaavxxbwb |
1qo8_A_271 | 1qo8 | A | 277 | 287 | VVNDDHSVVGA | EE-TTSBEEEE | bbxaalbxaeb |
1qz1_A_73 | 1qz1 | A | 79 | 89 | VTAEDGTQSEA | EE-TTS-EEEE | bbxaavxbbbb |
1r17_A_349 | 1r17 | A | 349 | 359 | IKDNSGEIIAT | EEETT--EEEE | xbxaagxxabb |
1ri6_A_152 | 1ri6 | A | 157 | 167 | TVSDDGHLVAQ | EE-TTS-EEEE | xxxaavxbbpx |
1ri6_A_16 | 1ri6 | A | 21 | 31 | NLNHEGALTLT | EE-TTS-EEEE | xbxaavxbbxa |
1s18_A_299 | 1s18 | A | 306 | 316 | AFTLDGRFLLP | EEETT--EEEE | bbxaavxxabx |
1s2b_A_52 | 1s2b | A | 57 | 67 | DWYGDGTYDAW | EEEETS-EEEE | bbbaavxbbbb |
1smp_I_64 | 1smp | I | 67 | 77 | LTQADGSAVAF | EE-TTS-EEEE | xbxaavxxabb |
1svp_A_115 | 1svp | A | 118 | 128 | VKNEDGDVIGH | EE-TTS-EEEE | bbxaavxxaeb |
1ule_A_37 | 1ule | A | 41 | 51 | FLSAGENILLH | EE-TT--EEEE | bbxaavxxabb |
1umh_A_219 | 1umh | A | 227 | 237 | LLSENEDVLAE | EE-TT--EEEE | bbxaavxxabb |
1usr_A_203 | 1usr | A | 212 | 222 | RTTATGRIFFS | EE-TTS-EEEE | bbxaavxxbxb |
1usr_A_473 | 1usr | A | 477 | 487 | IFYRNHTLRGV | EE-TTS-EEEE | bbxaavxxabb |
1ut9_A_240 | 1ut9 | A | 243 | 253 | LKNAAGVVVLE | EE-TTS-EEEE | xbxaavxxabb |
1ute_A_283 | 1ute | A | 287 | 297 | YIEASGKSLFK | EEETTS-EEEE | xbxaavxxabb |
1uuh_A_139 | 1uuh | A | 147 | 157 | IVNRDGTRYVQ | EE-TT--EEEE | bbxaavxxxbb |
1v04_A_244 | 1v04 | A | 249 | 259 | EKHANWTLTPL | EE-TTS-EEEE | xxxaavpbbwa |
1v3e_A_377 | 1v3e | A | 385 | 395 | DKGLNSIPKLK | EE-TT--EEEE | bbbaaUxxbbb |
1vjf_A_42 | 1vjf | A | 49 | 59 | LKDAKGQLWLI | EEETTS-EEEE | bbxaavxxbbb |
2sak_*_24 | 2sak | - | 31 | 41 | GVDSKGNELLS | EE-TT--EEEE | xbxaavxxabx |
3fru_A_91 | 3fru | A | 99 | 109 | ELAPDNSSLPT | EE-TTS-EEEE | bxxaavxxbwb |
3pmg_A_489 | 3pmg | A | 491 | 501 | LIFADGSRIIF | EEETTS-EEEE | bxxaagxbbbb |
3sil_*_36 | 3sil | - | 42 | 52 | CTTSKGTIVVF | EEE-TT--EEE | bbxaavxbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1cv8_*_119 | 1cv8 | * | NULCATALYTIC TRIAD. | H - 120 |
1e1a_A_174 | 1e1a | A | AC1CA BINDING SITE FOR CHAIN A | N - 175 |
1h6y_A_86 | 1h6y | A | XBAXYLAN BINDING SITE FOR CHAIN A | Y - 103 |
1ofz_A_73 | 1ofz | A | AC1FUL BINDING SITE FOR CHAIN A | I - 76 |
1ofz_A_73 | 1ofz | A | AC2AFL BINDING SITE FOR CHAIN A | R - 77 |
1ofz_A_73 | 1ofz | A | AC2AFL BINDING SITE FOR CHAIN A | E - 89 |
1ofz_A_73 | 1ofz | A | AC1FUL BINDING SITE FOR CHAIN A | Y - 92 |
1usr_A_473 | 1usr | A | AC3NDG BINDING SITE FOR CHAIN A | Y - 479 |
Clusters included in this Subclass |
CLUSTER: HA.3.111 |
CLUSTER: HA.3.112 |
CLUSTER: HA.4.47 |
CLUSTER: HA.4.9 |
CLUSTER: HA.5.20 |
CLUSTER: HA.5.25 |
CLUSTER: HA.5.9 |
CLUSTER: HA.6.20 |
CLUSTER: HA.6.4 |