Information on SUBCLASS 6.6.1 |
Subclass Accession number: 6437
Subclass: 6.6.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 15 Average sequence ID (%) : 12.5 +/- 15.8 Average RMSD (Å) : 1.393 +/- 0.339 Consensus geometry
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Consensus Sequence: | ppXpXpXhXX |
(φψ)-conformation: | bbaababpbb |
Pattern: | x | x | x | x | [degpqst] | [adegknrst] | x | [DEKNPQS] | x | [gilp] | [afgitv] | x | x |
Conservation: | -0.526 | -0.632 | -0.691 | 1.143 | -0.409 | -0.145 | -1.324 | 2.006 | -0.535 | 1.333 | -0.771 | -0.343 | 0.893 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1apy_B_302 | 1apy | B | 306 | 318 | MVYNSEKNQPTEE | EE--SS--S-EEE | xbbbaaxabxxxx |
1b3a_A_24 | 1b3a | A | 28 | 40 | FYTSGKCSNPAVV | EE--TTSSS--EE | bxxpaaxabwbxb |
1cm9_A_28 | 1cm9 | A | 32 | 44 | YPTSQLCSKPGVI | EE--TTSSS--EE | bxbpaaxabxbbb |
1eje_A_113 | 1eje | A | 113 | 124 | WTSSRRVKPPRI. | EE--SSSSS-EE. | bbxxaabapxbx. |
1el6_A_193 | 1el6 | A | 200 | 212 | TVTLDNQQTPTVF | EE--TT-SS-EEE | xbxpaabaxxbxb |
1j0p_A_9 | 1j0p | A | 9 | 20 | .LKMDKTKQPVVF | .EEE-SSSS-EEE | .xxxaababxbxb |
1joc_A_1388 | 1joc | A | 1389 | 1401 | NALTPSSKKPVRV | EE--TT-SS-EEE | bbxbaabaxpbxb |
1n9e_A_122 | 1n9e | A | 126 | 138 | VVYFGEGEEGYFE | EEEE-SSSS-EEE | bbxbaaxabxbxb |
1nr4_A_24 | 1nr4 | A | 28 | 40 | YQTSEDCSRDAIV | EE--TTSSS--EE | bxxpaaxaxxbbb |
1olz_A_271 | 1olz | A | 277 | 289 | VLRSPGLKVPVFY | EE--TT-SS-EEE | bxbbaababxbxb |
1qqg_A_69 | 1qqg | A | 74 | 86 | KRADSKNKHLVAL | EE--SS-SSEEEE | xbbbaababxbbb |
1qzz_A_331 | 1qzz | A | 338 | 350 | TSGSTTLPFDFSI | EE--SS-SS-EEE | bbbbaaxabxbbb |
1sdj_A_47 | 1sdj | A | 50 | 62 | LLHSDDSDVRIRY | EE--SSSSEEEEE | xbxbaababbbbb |
2cth_A_9 | 2cth | A | 9 | 20 | .LKMEATKQPVVF | .EEE-SSSS-EEE | .xbxaababxbxb |
2viu_A_24 | 2viu | A | 25 | 36 | LVKTITDDQIEV. | EE--SS-S-EEE. | xbxbaababbxb. |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HA.7.24 |
CLUSTER: HA.8.8 |
CLUSTER: HA.9.14 |