Information on SUBCLASS 4.2.4 |
Subclass Accession number: 644
Subclass: 4.2.4 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1 (>75 %) GO : GO:0015036 (>75 %) SCOP : 51904 (>75 %) 51905 (>75 %) 51943 (>75 %) 56924 (>50 %) 56935 (>50 %) |
Number of loops: 8 Average sequence ID (%) : 13.2 +/- 15.2 Average RMSD (Å) : 0.425 +/- 0.139 Consensus geometry
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Consensus Sequence: | XXpcXpXh |
(φψ)-conformation: | bbaagppb |
Pattern: | [kqrstw] | [CILWY] | x | [cdnsy] | [aekr] | [DKNT] | [EGNQ] | [dehs] | x | [ILVW] |
Conservation: | -1.232 | 0.173 | -0.843 | -0.622 | -0.189 | 1.411 | 0.903 | 0.065 | -1.146 | 1.482 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dn0_B_159 | 1dn0 | B | 161 | 170 | SWKYKNNSDI | EEEETTS-EE | bbbxaavxxb |
1gqz_A_58 | 1gqz | A | 61 | 70 | RIFNADGSEV | EEEETTS-EE | bbbxaavbxb |
1ihk_A_63 | 1ihk | A | 65 | 74 | QLYCRTGFHL | EEEETTS-EE | bbxxaagbxx |
1js8_A_2863 | 1js8 | A | 2868 | 2877 | TIKGIDGHVL | EEEESSS-EE | bbbxaagxxx |
1jsg_*_25 | 1jsg | - | 25 | 34 | VYLDEKQHAW | EEEETT--EE | bbbbaavxxb |
1oi0_A_106 | 1oi0 | A | 107 | 116 | KCYNRKGEEV | EEEETTS-EE | bbbxaavxxb |
1qpx_A_31 | 1qpx | A | 36 | 45 | WIENENQEKI | EEEETTS-EE | bbbxaavbxb |
1umh_A_219 | 1umh | A | 226 | 235 | RLLSENEDVL | EEE-TT--EE | bbbxaavxxa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1js8_A_2863 | 1js8 | A | MANALPHA-D-MANNOSE | L - 2877 |
Clusters included in this Subclass |
CLUSTER: HA.3.109 |
CLUSTER: HA.4.62 |