Information on SUBCLASS 6.19.1 |
Subclass Accession number: 6454
Subclass: 6.19.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 24.1 +/- 22.2 Average RMSD (Å) : 0.417 +/- 0.117 Consensus geometry
|
Consensus Sequence: | XphDGppppX |
(φψ)-conformation: | bpaalplpbb |
Pattern: | [ILV] | [ERSY] | [stv] | x | [DHKT] | [LMVY] | [DN] | [GR] | [gkst] | [DENQ] | [qry] | [fkr] | [iktv] |
Conservation: | 1.203 | -0.635 | -0.697 | -0.642 | -0.300 | 0.085 | 2.196 | 1.257 | -1.058 | 0.559 | -0.596 | -0.588 | -0.784 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1crz_A_159 | 1crz | A | 161 | 173 | LRVSDYDGYNQFV | EEEEETTS-S-EE | xbbbxaavxvxbx |
1ijq_A_388 | 1ijq | A | 388 | 400 | VRKMTLDRSEYTS | EEEEETTS---EE | bxbbxaalblxbx |
1ijq_A_563 | 1ijq | A | 564 | 576 | ISSIDVNGGNRKT | EEEEETTS-S-EE | bbbbxaavxlxbx |
1k32_A_253 | 1k32 | A | 254 | 266 | IYSTDLDGKDLRK | EEEEETTS-S-EE | xbbbxaavxlpbb |
1npe_A_1014 | 1npe | A | 1015 | 1027 | IEVAKMDGTQRRV | EEEEETTS-S-EE | bbbbxaavxlxbx |
1npe_A_1059 | 1npe | A | 1060 | 1072 | IETSHMDGTNRRI | EEEEETTS---EE | bbbbxaagxlxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1crz_A_159 | 1crz | A | MSESELENOMETHIONINE | Y - 166 |
Clusters included in this Subclass |
CLUSTER: HA.5.95 |