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Information on SUBCLASS 6.30.1
Subclass Accession number: 6465
Subclass: 6.30.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 13.3 +/- 13.6
Average RMSD (Å) : 0.633 +/- 0.115

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXhXXGpXXh
(φψ)-conformation: bbpabeppbb
Pattern: x[AFV]x[HI][DRW][AFP][DP]x[G][DTY][DPS]x[FVY][LVY][AN]
Conservation:-0.730-0.359-0.730-0.074-0.656-0.7301.203-0.6563.059-0.5070.013-0.3590.4580.0130.057
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gmi_A_781gmi   A8296AVFHDAPIGYDDFVAEEEE--SSSS-EEEEbxbbxxabexxxxab
1i2s_A_2431i2s   A247261IAIIWPPKGDPVVLAEEEEE-SSS--EEEEbbbbbxabexxbbbb
1ule_A_991ule   A99113RFQIRFDYGTSIYYNEEEEE-SSS--EEEEbbbbbbabexxbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gmi_A_781gmi   A     MGMAGNESIUM ION D - 86
1gmi_A_781gmi   A     MGMAGNESIUM ION A - 87
1gmi_A_781gmi   A     MGMAGNESIUM ION P - 88
1gmi_A_781gmi   A     MGMAGNESIUM ION G - 90
1gmi_A_781gmi   A     MGMAGNESIUM ION D - 92
1i2s_A_2431i2s   A     CITCITRIC ACID R - 244
1i2s_A_2431i2s   A     CITCITRIC ACID N - 245
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gmi_A_781gmi   A AC1MG BINDING SITE FOR CHAIN AD - 86

Clusters included in this Subclass
CLUSTER: HA.6.199