Information on SUBCLASS 6.32.1 |
Subclass Accession number: 6467
Subclass: 6.32.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 42.9 +/- 23.0 Average RMSD (Å) : 0.367 +/- 0.231 Consensus geometry
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Consensus Sequence: | VhXpGDppKh |
(φψ)-conformation: | bbpllpaabp |
Pattern: | x | [IK] | [TV] | x | x | [V] | [AY] | [EL] | [HN] | [G] | [D] | [KQ] | [KT] | [K] | [LP] | [AMV] | [CIT] | [FL] | [TV] | [IL] | [AT] |
Conservation: | -0.645 | -1.138 | -0.203 | -0.963 | -0.784 | 0.908 | -0.426 | -1.138 | 0.882 | 2.160 | 2.160 | 0.287 | -0.336 | 1.534 | -0.738 | -0.693 | -0.763 | -0.067 | -0.160 | 0.284 | -0.160 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dbx_A_45 | 1dbx | A | 45 | 65 | FKTLLVAENGDQKKLACFVLA | EEEEEEEBTT-TTSEEEEEEE | bbbbbbbxlvxaabxbbbbbp |
1knb_*_515 | 1knb | - | 515 | 535 | NIVSQVYLNGDKTKPVTLTIT | EEEEEEEBTT-TTSEEEEEEE | bbbbbbbxlvxaabxbxbbbb |
1qhv_A_515 | 1qhv | A | 515 | 535 | NIVSQVYLHGDKTKPMILTIT | EEEEEEEGGG-TTSEEEEEEE | bbbbxbbxlvxaabxbbxbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dbx_A_45 | 1dbx | A | MSESELENOMETHIONINE | K - 46 |
1dbx_A_45 | 1dbx | A | MSESELENOMETHIONINE | L - 48 |
1dbx_A_45 | 1dbx | A | MSESELENOMETHIONINE | L - 49 |
1dbx_A_45 | 1dbx | A | MSESELENOMETHIONINE | V - 50 |
1dbx_A_45 | 1dbx | A | MSESELENOMETHIONINE | A - 51 |
1dbx_A_45 | 1dbx | A | MSESELENOMETHIONINE | Q - 56 |
1dbx_A_45 | 1dbx | A | MSESELENOMETHIONINE | L - 64 |
1dbx_A_45 | 1dbx | A | MSESELENOMETHIONINE | A - 65 |
Clusters included in this Subclass |
CLUSTER: HA.6.162 |