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Information on SUBCLASS 6.40.1
Subclass Accession number: 6475
Subclass: 6.40.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.7 (>50 %)  1.7.2 (>50 %)  1.7.2.1
GO : GO:0005507 (>75 %)  GO:0016661 (>50 %)  GO:0016662 (>50 %)  GO:0046914 (>75 %)  GO:0050421 (>50 %)  
SCOP : 49502 (>75 %)  49503 (>75 %)  49550 (>75 %)  
Number of loops: 3

Average sequence ID (%) : 76.5 +/- -38.1
Average RMSD (Å) : 0.233 +/- 0.058

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: hVIDpXGTph
(φψ)-conformation: bbabaalpbb
Pattern: [V][V][E][F][T][M][TV][I][E][E][K][K][ILM][V][I][D][DR][AEK][G][T][ET][ILV][HQ][A][M][AT][F]
Conservation:-0.095-0.0950.6271.3490.6270.627-1.304-0.0950.6270.6270.6270.627-1.137-0.095-0.0951.349-1.639-2.0201.3490.627-1.516-1.057-0.500-0.0950.627-1.3041.349
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1j9q_A_381j9q   A3864VVEFTMVIEEKKIVIDDAGTEVHAMAFEEEEEEEEEEEEEE-STT--EEEEEEEbxbbbbbxbxbxbbabaavxbbxxbbx
1nif_*_381nif   -3864VVEFTMTIEEKKLVIDREGTEIHAMTFEEEEEEEEEEEEEE-STT--EEEEEEEbxbbbbbxbxbxbxabaavpbbxxbbb
1oe1_A_321oe1   A3258VVEFTMTIEEKKMVIDDKGTTLQAMTFEEEEEEEEEEEEEE-STT--EEEEEEExbxbbbbxbxbxbxabaavxbbxxbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1j9q_A_381j9q   A     CUCOPPER (II) ION I - 45
1j9q_A_381j9q   A     CUCOPPER (II) ION M - 62
1j9q_A_381j9q   A     CUCOPPER (II) ION F - 64
1oe1_A_321oe1   A     CUCOPPER (II) ION I - 39
1oe1_A_321oe1   A     CUCOPPER (II) ION M - 56

Clusters included in this Subclass
CLUSTER: HA.5.176