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Information on SUBCLASS 7.1.1
Subclass Accession number: 6480
Subclass: 7.1.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 32

Average sequence ID (%) : 17.4 +/- 21.1
Average RMSD (Å) : 0.847 +/- 0.450

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXXXXXXcXXX
(φψ)-conformation: bbpaabpgpbb
Pattern: x[dekpqrs]x[dekpqrst][hknqrstwy]x[dekpqs][adgnp]xxxxx
Conservation:-0.7520.214-0.5240.156-0.275-0.3441.0672.637-0.935-0.609-0.7390.102-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1amu_A_3961amu   A398410VDNPFVPGEKLYKEE-SSSTTSEEEExxxaabpgxbbxx
1aya_A_281aya   A3244RPSKSNPGDFTLSEE-SSSTT-EEEEbpxaabpgbbbxb
1c0a_A_1771c0a   A178189VPSRVHKGKFYA.EE-SSSTT-EEE.bxxaabpvbbxb.
1c1e_L_841c1e   L8898CFQSTHFFPTF..EEE-SSSS-EE..xbbaabpvwbb..
1d4t_A_281d4t   A3244RDSESVPGVYCLCEE-SSSTT-EEEEbxxaabpvbbbxb
1dqd_L_831dqd   L8797CQQRSTYPPTF..EEE-SSSS-EE..xbbaabxwwbb..
1dx5_I_3981dx5   I398408DCDPNTQASCE..EE-TTSTT-EE..xbxaabpvbbb..
1f5n_A_781f5n   A8395VPHPKKPGHILVLEE-SSSTT-EEEEbxxaabpvbbxbb
1fmk_*_1711fmk   -175187RESETTKGAYCLSEE-SSSTT-EEEEbxxaabxgxbbbb
1gzg_A_511gzg   A5264ESIPSMPGVERLSEE-TTSTT-EEEEbxbaabpvbbxbx
1hpi_*_481hpi   -4960GPCSVFPGKLVS.EEBTTSTTEEEE.bxbaabpvbbbx.
1i3z_A_271i3z   A3143RDSESVPGALCLCEE-SSSTT-EEEEbxxaabxgxbbxb
1jlx_A_451jlx   A4860EPSKTYDGLVHIKEE-SSSTT-EEEEbpxaabpvxbbbb
1jwo_A_1441jwo   A147159RESARHPGDYVLCEE-SSSTT-EEEEbxxaabxvbbbxb
1jyr_A_831jyr   A8698RESESAPGDFSLSEE-SSSTT-EEEEbxxaabpvbbbbb
1k9a_A_1031k9a   A107119RESTNYPGDYTLCEE-SSSTTSEEEEbxbaabpgbbbbb
1khb_A_671khb   A6778RRLKKYDNCWLA.EE-TTSBS-EEE.bxbaabxlbbbb.
1l0w_A_1831l0w   A184195VPYRHEPGLFYA.EE-TTSTT-EEE.bpxaabpvbbbb.
1l6s_A_441l6s   A4456KAVEAMPGVMRIPEE-TTSTT-EEEEbxxaabpgxbxxx
1lgy_A_971lgy   A98109SDYKPVKGAKVH.EE-TTSTT-EEE.bxxaabxvxbbp.
1lkk_A_1511lkk   A154166RESESTAGSFSLSEE-SSSTT-EEEEbpxaabpvbbbbb
1m61_A_341m61   A3749RQCLRSLGGYVLSEE-SSBTT-EEEEbxxaaxpvxbbxb
1nlb_L_841nlb   L8898CKQAYIPPLTF..EEE-SSSS-EE..bbbaabwwxbb..
1ohl_A_541ohl   A5566TEIDSLPNINRI.EE-TTSTT-EEE.xxxaabpvbbbx.
1opk_A_1671opk   A171183RESESSPGQRSISEE-SSSTT-EEEEbbxaabpvxbbbb
1osp_L_851osp   L8898CQQYWSPPPTF..EEE-SSSS-EE..bbxaabwwwbb..
1pv8_A_441pv8   A4556QPITSLPGVARY.EE-SSSTT-EEE.xpxaaxpvbbxb.
1qcf_A_1721qcf   A175187RDSETTKGSYSLSEE-SSSTTSEEEEbxxaabpgxbbbb
1tcr_A_1241tcr   A128140LKDPRSQDSTLCLEE-TTSTT-EEEExbxaabxgxbbbb
2shp_A_1342shp   A138150RESQSHPGDFVLSEE-SSSTT-EEEEbxxaaxxgxbbbb
3tgl_*_963tgl   -97108VSYPPVSGTKVH.EE-TTSTT-EEE.bxxaabxvbbbx.
4tsv_A_134tsv   A1729VANPQAEGQLQWSEE-TTSTTS--EEbxxaaxxvbxbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1amu_A_3961amu   A     MGMAGNESIUM ION Y - 409
1amu_A_3961amu   A     AMPADENOSINE MONOPHOSPHATE T - 411
1amu_A_3961amu   A     MGMAGNESIUM ION T - 411
1amu_A_3961amu   A     AMPADENOSINE MONOPHOSPHATE D - 413
1aya_A_281aya   A     PHSPHOSPHONO GROUP R - 32
1aya_A_281aya   A     PHSPHOSPHONO GROUP P - 33
1aya_A_281aya   A     PHSPHOSPHONO GROUP S - 34
1aya_A_281aya   A     PHSPHOSPHONO GROUP K - 35
1aya_A_281aya   A     PHSPHOSPHONO GROUP S - 36
1aya_A_281aya   A     PHSPHOSPHONO GROUP N - 37
1aya_A_281aya   A     PHSPHOSPHONO GROUP F - 41
1aya_A_281aya   A     PHSPHOSPHONO GROUP T - 42
1c1e_L_841c1e   L     ENH1,7,8,9,10,10-HEXACHLORO-4-METHYL-4-AZA-TRICYCLO[5.2.1.0(2,6)]DEC-8-ENE-3,5-DIONE F - 89
1c1e_L_841c1e   L     ENH1,7,8,9,10,10-HEXACHLORO-4-METHYL-4-AZA-TRICYCLO[5.2.1.0(2,6)]DEC-8-ENE-3,5-DIONE S - 91
1c1e_L_841c1e   L     DMR2-HYDROXY-SUCCINIC ACID T - 92
1c1e_L_841c1e   L     DMR2-HYDROXY-SUCCINIC ACID H - 93
1c1e_L_841c1e   L     DMR2-HYDROXY-SUCCINIC ACID F - 94
1c1e_L_841c1e   L     ENH1,7,8,9,10,10-HEXACHLORO-4-METHYL-4-AZA-TRICYCLO[5.2.1.0(2,6)]DEC-8-ENE-3,5-DIONE P - 96
1dx5_I_3981dx5   I     FMTFORMIC ACID D - 398
1f5n_A_781f5n   A     MGMAGNESIUM ION D - 97
1f5n_A_781f5n   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER D - 97
1f5n_A_781f5n   A     MGMAGNESIUM ION T - 98
1f5n_A_781f5n   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER T - 98
1fmk_*_1711fmk   *     PTRO-PHOSPHOTYROSINE R - 175
1fmk_*_1711fmk   *     PTRO-PHOSPHOTYROSINE E - 176
1fmk_*_1711fmk   *     PTRO-PHOSPHOTYROSINE S - 177
1fmk_*_1711fmk   *     PTRO-PHOSPHOTYROSINE E - 178
1fmk_*_1711fmk   *     PTRO-PHOSPHOTYROSINE T - 179
1fmk_*_1711fmk   *     PTRO-PHOSPHOTYROSINE T - 180
1fmk_*_1711fmk   *     PTRO-PHOSPHOTYROSINE Y - 184
1fmk_*_1711fmk   *     PTRO-PHOSPHOTYROSINE C - 185
1gzg_A_511gzg   A     LAF5-FLUOROLEVULINIC ACID M - 57
1hpi_*_481hpi   *     FS4IRON/SULFUR CLUSTER P - 50
1hpi_*_481hpi   *     FS4IRON/SULFUR CLUSTER C - 51
1hpi_*_481hpi   *     FS4IRON/SULFUR CLUSTER S - 52
1hpi_*_481hpi   *     FS4IRON/SULFUR CLUSTER V - 53
1hpi_*_481hpi   *     FS4IRON/SULFUR CLUSTER F - 54
1hpi_*_481hpi   *     FS4IRON/SULFUR CLUSTER V - 59
1hpi_*_481hpi   *     FS4IRON/SULFUR CLUSTER S - 60
1i3z_A_271i3z   A     PTRO-PHOSPHOTYROSINE R - 31
1i3z_A_271i3z   A     PTRO-PHOSPHOTYROSINE D - 32
1i3z_A_271i3z   A     PTRO-PHOSPHOTYROSINE S - 33
1i3z_A_271i3z   A     PTRO-PHOSPHOTYROSINE E - 34
1i3z_A_271i3z   A     PTRO-PHOSPHOTYROSINE S - 35
1i3z_A_271i3z   A     PTRO-PHOSPHOTYROSINE V - 36
1i3z_A_271i3z   A     PTRO-PHOSPHOTYROSINE C - 41
1jlx_A_451jlx   A     FORFORMYL GROUP V - 47
1jlx_A_451jlx   A     FORFORMYL GROUP P - 49
1jlx_A_451jlx   A     FORFORMYL GROUP V - 57
1jyr_A_831jyr   A     PTRO-PHOSPHOTYROSINE R - 86
1jyr_A_831jyr   A     PTRO-PHOSPHOTYROSINE E - 87
1jyr_A_831jyr   A     PTRO-PHOSPHOTYROSINE S - 88
1jyr_A_831jyr   A     PTRO-PHOSPHOTYROSINE E - 89
1jyr_A_831jyr   A     PTRO-PHOSPHOTYROSINE S - 90
1jyr_A_831jyr   A     PTRO-PHOSPHOTYROSINE A - 91
1jyr_A_831jyr   A     PTRO-PHOSPHOTYROSINE F - 95
1jyr_A_831jyr   A     PTRO-PHOSPHOTYROSINE S - 96
1khb_A_671khb   A     EDO1,2-ETHANEDIOL Y - 72
1l6s_A_441l6s   A     DSB4,7-DIOXOSEBACIC ACID M - 49
1lkk_A_1511lkk   A     PHSPHOSPHONO GROUP R - 154
1lkk_A_1511lkk   A     PHSPHOSPHONO GROUP E - 155
1lkk_A_1511lkk   A     PHSPHOSPHONO GROUP S - 156
1lkk_A_1511lkk   A     PHSPHOSPHONO GROUP E - 157
1lkk_A_1511lkk   A     PHSPHOSPHONO GROUP S - 158
1lkk_A_1511lkk   A     PHSPHOSPHONO GROUP T - 159
1lkk_A_1511lkk   A     PHSPHOSPHONO GROUP S - 164
1lkk_A_1511lkk   A     PHSPHOSPHONO GROUP S - 166
1pv8_A_441pv8   A     PB13-(2-AMINOETHYL)-4-(AMINOMETHYL)HEPTANEDIOIC ACID L - 50
1qcf_A_1721qcf   A     PTRO-PHOSPHOTYROSINE D - 176
1qcf_A_1721qcf   A     PTRO-PHOSPHOTYROSINE S - 185

Clusters included in this Subclass
CLUSTER: HA.6.11
CLUSTER: HA.8.1