Information on SUBCLASS 7.5.1 |
Subclass Accession number: 6486
Subclass: 7.5.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 9 Average sequence ID (%) : 53.2 +/- 27.4 Average RMSD (Å) : 0.356 +/- 0.219 Consensus geometry
|
Consensus Sequence: | XhGXppGXLXF |
(φψ)-conformation: | pbepaagppbp |
Pattern: | x | [iv] | [ekl] | [lmv] | [g] | [adgs] | [des] | [dnsv] | [g] | [agns] | [fl] | [akv] | [f] | x |
Conservation: | -1.073 | 0.555 | -0.688 | 0.035 | 1.625 | -0.586 | 0.139 | -0.754 | 1.625 | -0.836 | 0.060 | -0.780 | 1.625 | -0.948 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ag6_*_2 | 1ag6 | - | 2 | 15 | EVLLGGDDGSLAFL | EEEES-TT----EE | bbxxexaavxxbxb |
1bxu_A_2 | 1bxu | A | 2 | 15 | AIKMGADNGMLAFE | EEEES-TTS-SSEE | bbxbexaavxxbxb |
1byp_A_2 | 1byp | A | 2 | 15 | EVLLGSSDGGLAFV | EEEES-TTS--SEE | bbxxexaagpxbxb |
1iuz_*_1 | 1iuz | - | 2 | 15 | IVKLGGDDGSLAFV | EEEES-TTS--SEE | xbxbMxaavxxbxb |
1kdj_*_2 | 1kdj | - | 2 | 15 | KVEVGDEVGNFKFY | EEEES-TT----EE | bbxbebaavxxbxb |
1pcs_*_2 | 1pcs | - | 2 | 15 | TVKMGSDSGALVFE | EEEES-TTS-SSEE | bbxxMxaavbxbxb |
1plc_*_2 | 1plc | - | 2 | 15 | DVLLGADDGSLAFV | EEEES-TT--S-EE | xbxxMxaavxxbxb |
2plt_*_1 | 2plt | - | 2 | 15 | TVKLGADSGALEFV | EEEES-TT--SSEE | bbxxMxaagxxbxb |
7pcy_*_1 | 7pcy | - | 2 | 15 | IVKLGGDDGSLAFV | EEEES-TT--SSEE | bbxbexaavxxbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ag6_*_2 | 1ag6 | * | CUCOPPER (II) ION | L - 12 |
1bxu_A_2 | 1bxu | A | CUCOPPER (II) ION | F - 14 |
1kdj_*_2 | 1kdj | * | CUCOPPER (II) ION | V - 5 |
1kdj_*_2 | 1kdj | * | CUCOPPER (II) ION | F - 12 |
1plc_*_2 | 1plc | * | CUCOPPER (II) ION | L - 5 |
2plt_*_1 | 2plt | * | CACALCIUM ION | F - 14 |
2plt_*_1 | 2plt | * | CACALCIUM ION | V - 15 |
Clusters included in this Subclass |
CLUSTER: HA.7.25 |