Information on SUBCLASS 7.7.1 |
Subclass Accession number: 6488
Subclass: 7.7.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 9.1 +/- 11.2 Average RMSD (Å) : 1.038 +/- 0.213 Consensus geometry
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Consensus Sequence: | hXppXXXXXXX |
(φψ)-conformation: | bbabapaapbb |
Pattern: | x | [acfilvw] | x | [enpt] | [DEGST] | x | x | [degp] | x | [ades] | x | [fiklv] | x |
Conservation: | -1.152 | -0.757 | -0.125 | 1.456 | 1.462 | -1.004 | -0.120 | 0.320 | -1.127 | 1.218 | -1.192 | 0.566 | 0.455 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a06_*_147 | 1a06 | - | 147 | 159 | LLYYSLDEDSKIM | EEESSSSTT--EE | xbxabaxaapxxb |
1aog_A_135 | 1aog | A | 137 | 149 | NVRESADPASAVK | EEESSSSTTS-EE | xbbabaxaaxxxa |
1dxr_H_90 | 1dxr | H | 90 | 102 | LAQTDGFEGAPLQ | EEESSSSTT--EE | bbxabapaaxxxb |
1g86_A_35 | 1g86 | A | 39 | 51 | DFHTEMKEESDIV | EEESSSSTTS-EE | bxxabaxaaxxba |
1j8m_F_269 | 1j8m | F | 271 | 283 | FIGTGEKIDELEV | EEE-SSSTT-EEE | bbxabaxaaxbbx |
1kxi_A_2 | 1kxi | A | 2 | 14 | KCHNTQLPFIYKT | EEE-SSSSS-EEE | xbxababaapbbx |
1rjb_A_576 | 1rjb | A | 579 | 591 | VQVTGSSDNEYFY | EEE-SSSTT-EEE | bbxabaxaaxbbx |
2tod_A_351 | 2tod | A | 355 | 367 | VWGPTCDGLDQIV | EE-SSS-TT-EEE | bbxaxaxaaxbab |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1g86_A_35 | 1g86 | A | NEQN-ETHYLMALEIMIDE | Q - 37 |
1g86_A_35 | 1g86 | A | NEQN-ETHYLMALEIMIDE | H - 53 |
1g86_A_35 | 1g86 | A | NEQN-ETHYLMALEIMIDE | Q - 55 |
2tod_A_351 | 2tod | A | DMOALPHA-DIFLUOROMETHYLORNITHINE | T - 359 |
2tod_A_351 | 2tod | A | PLPPYRIDOXAL-5'-PHOSPHATE | C - 360 |
2tod_A_351 | 2tod | A | DMOALPHA-DIFLUOROMETHYLORNITHINE | C - 360 |
2tod_A_351 | 2tod | A | PLPPYRIDOXAL-5'-PHOSPHATE | D - 361 |
2tod_A_351 | 2tod | A | DMOALPHA-DIFLUOROMETHYLORNITHINE | D - 361 |
2tod_A_351 | 2tod | A | DMOALPHA-DIFLUOROMETHYLORNITHINE | G - 362 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
2tod_A_351 | 2tod | A | CAACATALYTIC SITE | C - 360 |
2tod_A_351 | 2tod | A | CAACATALYTIC SITE | D - 361 |
Clusters included in this Subclass |
CLUSTER: HA.8.21 |
CLUSTER: HA.9.42 |