Information on SUBCLASS 7.8.2 |
Subclass Accession number: 6490
Subclass: 7.8.2 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0004857 (>75 %) GO:0004866 (>75 %) GO:0004867 (>75 %) GO:0005524 (>75 %) GO:0008289 (>75 %) GO:0017076 (>75 %) GO:0030414 (>75 %) GO:0030554 (>75 %) SCOP : 49776 (>75 %) 49777 (>75 %) 49778 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 93.7 +/- -82.6 Average RMSD (Å) : 0.100 +/- 0.000 Consensus geometry
|
Consensus Sequence: | MKGNcISSGpV |
(φψ)-conformation: | ppeapaaapbp |
Pattern: | [W] | [H] | [H] | [F] | [L] | [V] | [V] | [N] | [M] | [K] | [G] | [N] | [DN] | [I] | [S] | [S] | [G] | [NT] | [V] | [L] | [S] |
Conservation: | 3.004 | 1.450 | 1.450 | 0.413 | -0.623 | -0.623 | -0.623 | 0.413 | -0.105 | -0.105 | 0.413 | 0.413 | -0.881 | -0.623 | -0.623 | -0.623 | 0.413 | -1.276 | -0.623 | -0.623 | -0.623 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a44_*_83 | 1a44 | - | 83 | 103 | WHHFLVVNMKGNNISSGTVLS | EEEEEEEEEETT-GGGSEEEE | bxabbbblxxeaxaaaxxxab |
1beh_A_84 | 1beh | A | 84 | 104 | WHHFLVVNMKGNDISSGTVLS | EEEEEEEEEETTBGGGSEEEE | xxabbbblxxeaxaaaxxxab |
1kn3_A_84 | 1kn3 | A | 84 | 104 | WHHFLVVNMKGNDISSGNVLS | EEEEEEEEEETTBGGGSEEEE | bxabbbblxxeaxaaaxbxab |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a44_*_83 | 1a44 | * | ACTACETATE ION | W - 83 |
1a44_*_83 | 1a44 | * | ACTACETATE ION | H - 85 |
1beh_A_84 | 1beh | A | CACCACODYLATE ION | W - 84 |
1beh_A_84 | 1beh | A | CACCACODYLATE ION | H - 85 |
1beh_A_84 | 1beh | A | CACCACODYLATE ION | H - 86 |
Clusters included in this Subclass |
CLUSTER: HA.6.195 |