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Information on SUBCLASS 8.1.1
Subclass Accession number: 6516
Subclass: 8.1.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 13

Average sequence ID (%) : 14.6 +/- 18.1
Average RMSD (Å) : 0.885 +/- 0.524

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXpXXcXXpXXX
(φψ)-conformation: bbpppgbappbb
Pattern: x[fiktv]xxx[dgn]xxxxxxx
Conservation:-0.6110.003-0.336-0.317-0.2683.211-0.298-0.5550.302-0.254-0.499-0.4700.091
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fx2_A_10831fx2   A10881100DVALRGVSDPVKMEE--TT-SS-EEEbbxbxgxabxbxb
1fx4_A_10711fx4   A10761088ATVLRGVPEPVRMEE--TT-SS-EEExbxbxvbabxbxb
1fzc_B_2771fzc   B277289ATNTDGKNYCGLPEE--TT-SS--EEbbxxpvbabxabx
1hqz_1_651hqz   17082RVSPPGSDVEKIIEE--TT-S--EEEbbbxxgbaxbbbb
1mix_A_3111mix   A316328KEKMKGKNKLVPREE--SS-SS-EEEbxbxplbaxxbwb
1mk7_B_3111mk7   B316328KEKMKGKNKLVPREE--TT-SS-EEEbbxbxvbappbwb
1mx1_A_10361mx1   A10371049FVSLEGFAQPVAIEE--TT-SS-EEExbxbpgbaxxxxb
1ny5_A_2591ny5   A259270KFYRLGGRKEIE.EE--BT--S-EE.bbbxxvbaxpbb.
1oey_A_3921oey   A393404SYRPRDSNELVP.EE--TT-SS-EE.bbxxpvbaxxbx.
1qas_A_3531qas   A353365IIYHGYTFTSKILEES-TTS----EEbbbxpvbaxpbbx
1qo8_A_2271qo8   A228240LKRSGGARVDRTHEE--TT-SS--EEbbbbpvxabxaxb
1utc_A_1981utc   A203215QFKMEGNAEESTLEE--TT-SS-EEExbbxxvxabpxxx
3pmg_A_1703pmg   A173185QFDLENKFKPFTVEE--TT-SS-EEEbbxxplbaxxxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1mx1_A_10361mx1   A     SIAO-SIALIC ACID F - 1050
1mx1_A_10361mx1   A     SIAO-SIALIC ACID L - 1051
1mx1_A_10361mx1   A     SIAO-SIALIC ACID G - 1052
1mx1_A_10361mx1   A     SIAO-SIALIC ACID I - 1053
1mx1_A_10361mx1   A     SIAO-SIALIC ACID P - 1054
1ny5_A_2591ny5   A     PO4PHOSPHATE ION K - 259
1ny5_A_2591ny5   A     PO4PHOSPHATE ION F - 260
1ny5_A_2591ny5   A     PO4PHOSPHATE ION Y - 261
1ny5_A_2591ny5   A     PO4PHOSPHATE ION R - 262
1ny5_A_2591ny5   A     GOLGLYCEROL R - 266
1ny5_A_2591ny5   A     GOLGLYCEROL K - 267
1ny5_A_2591ny5   A     PO4PHOSPHATE ION I - 269
1oey_A_3921oey   A     MSESELENOMETHIONINE Y - 394
1oey_A_3921oey   A     MSESELENOMETHIONINE R - 395
1qo8_A_2271qo8   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 241
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1qo8_A_2271qo8   A AC3HEM BINDING SITE FOR RESDIUE A603D - 227

Clusters included in this Subclass
CLUSTER: HA.7.110
CLUSTER: HA.7.26
CLUSTER: HA.8.6