Information on SUBCLASS 8.10.1 |
Subclass Accession number: 6526
Subclass: 8.10.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 20.0 +/- 26.5 Average RMSD (Å) : 0.933 +/- 0.175 Consensus geometry
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Consensus Sequence: | XXphGXpXXXXX |
(φψ)-conformation: | bbpplbabpabb |
Pattern: | x | [GKLTV] | x | x | [DGP] | [G] | [ADKS] | [NRST] | x | [CDNPS] | [agr] | x | x |
Conservation: | -0.629 | -0.724 | -0.568 | 0.170 | 0.288 | 3.101 | -0.030 | 0.414 | -0.481 | -0.305 | -0.461 | -0.477 | -0.299 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1d4d_A_231 | 1d4d | A | 232 | 244 | VGRMGGASVNRSH | EE--TT-SS--EE | bbbbpvbappNxx |
1fzc_B_277 | 1fzc | B | 277 | 289 | ATNTDGKNYCGLP | EE--TT-SS--EE | bbxxpvbabxabx |
1ow1_A_3608 | 1ow1 | A | 3613 | 3625 | NVPNPGSNQPAYV | EE--TT--S--EE | xbxxpvbaxwabb |
1q9i_A_232 | 1q9i | A | 233 | 245 | VGMMGGASVNRAH | EE--TT-SS--EE | bbxbxvbabxNxx |
1qo8_A_227 | 1qo8 | A | 228 | 240 | LKRSGGARVDRTH | EE--TT-SS--EE | bbbbpvxabxaxb |
1stm_A_70 | 1stm | A | 75 | 87 | RLYNPGDTDSVHA | EE--TT-SS-SEE | bxbxxvxabxabb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1d4d_A_231 | 1d4d | A | FADFLAVIN-ADENINE DINUCLEOTIDE | M - 235 |
1d4d_A_231 | 1d4d | A | SINSUCCINIC ACID | M - 235 |
1q9i_A_232 | 1q9i | A | FADFLAVIN-ADENINE DINUCLEOTIDE | M - 236 |
1q9i_A_232 | 1q9i | A | TEOMALATE LIKE INTERMEDIATE | M - 236 |
1qo8_A_227 | 1qo8 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | R - 241 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1qo8_A_227 | 1qo8 | A | AC3HEM BINDING SITE FOR RESDIUE A603 | D - 227 |
Clusters included in this Subclass |
CLUSTER: HA.10.14 |