Information on SUBCLASS 8.13.1 |
Subclass Accession number: 6529
Subclass: 8.13.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0004672 (>50 %) GO:0016301 (>50 %) GO:0016773 (>50 %) SCOP : 56111 (>50 %) 56112 (>50 %) 88854 (>50 %) |
Number of loops: 5 Average sequence ID (%) : 20.0 +/- 29.8 Average RMSD (Å) : 1.480 +/- 0.295 Consensus geometry
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Consensus Sequence: | hXXhXpXcXhXp |
(φψ)-conformation: | bbppabplppbb |
Pattern: | [FIK] | [LVW] | x | [EGPS] | [AP] | [AKT] | [qrt] | [EPQ] | [GN] | x | [lpt] | x | [DHQ] | [FIV] | [ERT] | [LTV] |
Conservation: | -0.688 | 0.247 | -1.070 | -0.596 | 1.796 | -0.025 | -0.548 | 0.577 | 2.078 | -1.027 | -1.136 | -1.212 | 0.640 | 0.714 | 0.030 | 0.220 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aye_*_36 | 1aye | - | 37 | 52 | FWKSPTTPGETAHVRV | EEE---STT--EEEEE | xabxxabpvxxbbbxb |
1fl2_A_290 | 1fl2 | A | 292 | 307 | KLIPAAVEGGLHQIET | EEE--SSTT--EEEEE | bbbxpabpvxxxbbxb |
1hyu_A_290 | 1hyu | A | 292 | 307 | KLVPAATEGGLHQIET | EEE--SSTTS-EEEEE | bbbxpabxvxbxbbxb |
1pca_*_36 | 1pca | - | 37 | 52 | FWRGPARPGFPIDVRV | EEE---STTS-EEEEE | xabxpabpvxwbxbxb |
1sx5_A_62 | 1sx5 | A | 62 | 77 | IVEEPKQQNHYPDFTL | EEE--SSTT-B-SEEE | xbbbpabxvbxwabbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1fl2_A_290 | 1fl2 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | A - 290 |
1fl2_A_290 | 1fl2 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | S - 291 |
1sx5_A_62 | 1sx5 | A | MNMANGANESE (II) ION | Q - 68 |
1sx5_A_62 | 1sx5 | A | MNMANGANESE (II) ION | H - 71 |
1sx5_A_62 | 1sx5 | A | MNMANGANESE (II) ION | D - 74 |
Clusters included in this Subclass |
CLUSTER: HA.9.33 |