Information on SUBCLASS 8.25.1 |
Subclass Accession number: 6541
Subclass: 8.25.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 4.2 (>50 %) 4.2.1 (>50 %) 4.2.1.70 GO : GO:0004730 (>75 %) GO:0016829 (>75 %) GO:0016835 (>75 %) GO:0016836 (>75 %) SCOP : 100877 (>75 %) 55120 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 27.5 +/- 17.3 Average RMSD (Å) : 0.733 +/- 0.231 Consensus geometry
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Consensus Sequence: | XXAGpXDXXXXX |
(φψ)-conformation: | bbaepbpaapbe |
Pattern: | x | x | [A] | [G] | [QRT] | [KL] | [D] | x | x | [AT] | [TV] | [GT] | x | x | [LVW] | [IL] | [CGT] |
Conservation: | -0.457 | -0.585 | 1.083 | 2.239 | -0.393 | -0.458 | 2.239 | -0.842 | -0.778 | 0.096 | 0.228 | -0.005 | -0.906 | -0.778 | -0.521 | 0.553 | -0.714 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1sgv_A_35 | 1sgv | A | 36 | 52 | GHAGTLDPMATGVLVIG | EESS---TT-EEEEEEE | bbaexbpaaxbexbxbb |
1szw_A_73 | 1szw | A | 74 | 90 | SFAGQKDKHAVTEQWLC | EES----TTSEEEEEEE | bbaexbxaabxbxbxbb |
1vio_A_96 | 1vio | A | 96 | 112 | HSAGRLDVDTTGLVLLT | EESS---TT-EEEEEEE | bxaexbxaaxbepbxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1vio_A_96 | 1vio | A | BU11,4-BUTANEDIOL | R - 100 |
1vio_A_96 | 1vio | A | BU11,4-BUTANEDIOL | L - 101 |
1vio_A_96 | 1vio | A | BU11,4-BUTANEDIOL | D - 102 |
1vio_A_96 | 1vio | A | BU11,4-BUTANEDIOL | V - 103 |
1vio_A_96 | 1vio | A | BU11,4-BUTANEDIOL | D - 104 |
1vio_A_96 | 1vio | A | BU11,4-BUTANEDIOL | T - 105 |
Clusters included in this Subclass |
CLUSTER: HA.7.118 |