Information on SUBCLASS 9.8.1 |
Subclass Accession number: 6553
Subclass: 9.8.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 55.2 +/- 22.8 Average RMSD (Å) : 0.280 +/- 0.045 Consensus geometry
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Consensus Sequence: | hpXpPhphGpPNX |
(φψ)-conformation: | bbabppbplpwbb |
Pattern: | [eq] | [AV] | [ET] | [V] | [FL] | [PST] | [knr] | [KS] | [P] | [LV] | [ent] | [FL] | [GR] | [EKQ] | [P] | [N] | [ITV] | [L] | [IV] | [C] | [FL] | [IV] | [DS] | [KN] | [FIL] |
Conservation: | -1.079 | -0.577 | -0.469 | 0.390 | -0.216 | -0.746 | -1.209 | -0.441 | 1.841 | -0.281 | -1.377 | -0.377 | -0.399 | -0.290 | 1.841 | 1.358 | -0.659 | 0.390 | 0.166 | 2.809 | -0.012 | 0.156 | -0.113 | -0.133 | -0.574 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fng_A_88 | 1fng | A | 88 | 112 | EVTVLSRSPVNLGEPNILICFIDKF | EEEEEESS---TTS-EEEEEEEEEE | bbbbbxabpxbpvbwbbxbbxbblb |
1fv1_A_88 | 1fv1 | A | 88 | 112 | EVTVLTNSPVELREPNVLICFIDKF | EEEEEESS---TTS-EEEEEEEEEE | bbbbbbabpxbpvxwbbxbbbbblb |
1hdm_A_99 | 1hdm | A | 99 | 123 | IAEVFTLKPLEFGKPNTLVCFVSNL | EEEEEESS---TTS-EEEEEEEEEE | bxbbbbabxpbpvxpbbxbbxbbUx |
1iak_A_88 | 1iak | A | 88 | 112 | QATVFPKSPVLLGQPNTLICFVDNI | EEEEEESS---TTS-EEEEEEEEEE | bbbbbxabxxbpvxwbbxbbbbblx |
1uvq_A_91 | 1uvq | A | 91 | 115 | EVTVFSKSPVTLGQPNTLICLVDNI | EEEEEESS---TTS-EEEEEEEEEE | bbbbbxabpxbpvbwbbxbbxbblx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1uvq_A_91 | 1uvq | A | GLYGLYCINE | L - 111 |
1uvq_A_91 | 1uvq | A | GLYGLYCINE | D - 113 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1uvq_A_91 | 1uvq | A | AC9GLY BINDING SITE FOR CHAIN A | D - 113 |
Clusters included in this Subclass |
CLUSTER: HA.9.28 |