Information on SUBCLASS 9.9.1 |
Subclass Accession number: 6554
Subclass: 9.9.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 32.0 +/- 25.1 Average RMSD (Å) : 1.020 +/- 0.164 Consensus geometry
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Consensus Sequence: | hpXXXThpGRhXp |
(φψ)-conformation: | bbaaapaagppbb |
Pattern: | [ksy] | [AFVY] | [HKNP] | [PQ] | [AENS] | x | [AT] | [apv] | [DT] | [G] | [R] | [ALP] | [GST] | x | [at] |
Conservation: | -0.912 | -0.471 | -0.305 | 0.664 | -0.415 | -1.192 | 0.642 | -0.694 | 0.289 | 2.360 | 1.805 | -0.643 | -0.134 | -0.711 | -0.282 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ftr_A_53 | 1ftr | A | 60 | 74 | YVPPEETPDGRPGVT | EE-GGGSTTSS-EEE | bbxaaabaavbxbbb |
1kfs_A_658 | 1kfs | A | 658 | 672 | SYHQAVTATGRLSST | EEESS--SSS--EEE | xxbaaaxaagxxbbb |
1m5h_A_53 | 1m5h | A | 59 | 73 | KAKPSETPDGRPGYY | EE-GGGSTTS--EEE | xbxaaaxaavbxbbx |
1nk4_A_605 | 1nk4 | A | 605 | 619 | IFNQALTQTGRLSST | EEESS--SSS--EEE | bxxaaaxaagxbbbb |
1t7p_A_419 | 1t7p | A | 419 | 433 | SVNPNGAVTGRATHA | EEETT-STTS--EEE | xbxaaaxaagxxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1kfs_A_658 | 1kfs | A | ZNZINC ION | R - 668 |
1nk4_A_605 | 1nk4 | A | SUCSUCROSE | I - 605 |
1nk4_A_605 | 1nk4 | A | SUCSUCROSE | F - 606 |
1nk4_A_605 | 1nk4 | A | SUCSUCROSE | N - 607 |
1nk4_A_605 | 1nk4 | A | SUCSUCROSE | Q - 608 |
1nk4_A_605 | 1nk4 | A | SUCSUCROSE | A - 609 |
1nk4_A_605 | 1nk4 | A | SUCSUCROSE | L - 610 |
1nk4_A_605 | 1nk4 | A | SUCSUCROSE | T - 619 |
1t7p_A_419 | 1t7p | A | 2DA2',3'-DIDEOXYADENOSINE-5'-MONOPHOSPHATE | R - 429 |
1t7p_A_419 | 1t7p | A | DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE | R - 429 |
Clusters included in this Subclass |
CLUSTER: HA.9.24 |