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Information on SUBCLASS 9.9.1
Subclass Accession number: 6554
Subclass: 9.9.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 32.0 +/- 25.1
Average RMSD (Å) : 1.020 +/- 0.164

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hpXXXThpGRhXp
(φψ)-conformation: bbaaapaagppbb
Pattern: [ksy][AFVY][HKNP][PQ][AENS]x[AT][apv][DT][G][R][ALP][GST]x[at]
Conservation:-0.912-0.471-0.3050.664-0.415-1.1920.642-0.6940.2892.3601.805-0.643-0.134-0.711-0.282
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ftr_A_531ftr   A6074YVPPEETPDGRPGVTEE-GGGSTTSS-EEEbbxaaabaavbxbbb
1kfs_A_6581kfs   A658672SYHQAVTATGRLSSTEEESS--SSS--EEExxbaaaxaagxxbbb
1m5h_A_531m5h   A5973KAKPSETPDGRPGYYEE-GGGSTTS--EEExbxaaaxaavbxbbx
1nk4_A_6051nk4   A605619IFNQALTQTGRLSSTEEESS--SSS--EEEbxxaaaxaagxbbbb
1t7p_A_4191t7p   A419433SVNPNGAVTGRATHAEEETT-STTS--EEExbxaaaxaagxxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kfs_A_6581kfs   A     ZNZINC ION R - 668
1nk4_A_6051nk4   A     SUCSUCROSE I - 605
1nk4_A_6051nk4   A     SUCSUCROSE F - 606
1nk4_A_6051nk4   A     SUCSUCROSE N - 607
1nk4_A_6051nk4   A     SUCSUCROSE Q - 608
1nk4_A_6051nk4   A     SUCSUCROSE A - 609
1nk4_A_6051nk4   A     SUCSUCROSE L - 610
1nk4_A_6051nk4   A     SUCSUCROSE T - 619
1t7p_A_4191t7p   A     2DA2',3'-DIDEOXYADENOSINE-5'-MONOPHOSPHATE R - 429
1t7p_A_4191t7p   A     DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE R - 429

Clusters included in this Subclass
CLUSTER: HA.9.24