Information on SUBCLASS 9.13.1 |
Subclass Accession number: 6558
Subclass: 9.13.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0005543 (>75 %) GO:0008289 (>75 %) SCOP : 50728 (>75 %) 50729 (>75 %) 50730 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 21.3 +/- 21.9 Average RMSD (Å) : 1.175 +/- 0.750 Consensus geometry
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Consensus Sequence: | hXXpphpXXXhXh |
(φψ)-conformation: | bbabaapabpabb |
Pattern: | x | [ILV] | x | [VY] | [EF] | [EKL] | [DSY] | [DEQT] | [LMT] | [DES] | x | [EW] | [KP] | x | x | [AIV] | [IKL] | x |
Conservation: | -1.439 | 1.150 | -1.375 | 1.845 | 0.590 | -0.462 | -0.585 | -0.043 | 0.243 | 0.465 | -0.690 | 0.687 | 1.942 | -0.349 | -1.025 | 0.452 | -0.547 | -0.858 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1eaz_A_219 | 1eaz | A | 219 | 236 | TIGYFKSELEKEPLRVIP | EEEEESSTT-SS-SEEEE | bbbbbabaaxabxabbbx |
1fao_A_192 | 1fao | A | 192 | 209 | ELKYFKDQMSPEPIRILD | EEEEESSTT-SS-SEEEE | bbbbbabaaxabxabbbb |
1fgy_A_292 | 1fgy | A | 292 | 309 | CLYYFEYTTDKEPRGIIP | EEEEESSTT-SS-SEEEE | bbxbbabaapabxabbbx |
1lsh_B_1391 | 1lsh | B | 1394 | 1411 | IVAVELSDLSVWKLCAKF | EEEEES-TT---EEEEEE | bbbbxaxaaxaxbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Clusters included in this Subclass |
CLUSTER: HA.8.49 |